C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: lysine (K)-specific demethylase 8
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000030752 Kdm8 10090 + 7:125444676-125462265 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000033010 Kdm8-001 125444676-125462265 protein_coding
  ENSMUST00000135129 Kdm8-002 125444684-125460021 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000033010
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000033010 1.738±0.45 2.244±0.37 2.586±0.16 1.582±0.61 0.776±0.00 1.167±0.33 1.564±0.26 1.230±0.15 2.619±1.92 1.668±0.44 3.586±0.54 1.774±0.77 2.548±1.01 1.013±0.49

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003V9 CIL_0003V9_0003 CGP 7:125444676-125491596

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000086 ISS G2/M transition of mitotic cell cycle
GO:0003674 ND molecular_function
GO:0003682 ISS chromatin binding
GO:0005575 ND cellular_component
GO:0005634 ISS nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0008150 ND biological_process
GO:0045893 ISS positive regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding
GO:0051864 ISS histone demethylase activity (H3-K36 specific)
GO:0055114 IEA oxidation-reduction process
GO:0070544 ISS histone H3-K36 demethylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000037844 kdm8 lysine (K)-specific demethylase 8 protein_coding Danio_rerio
ENSG00000155666 KDM8 lysine (K)-specific demethylase 8 protein_coding Homo_sapiens

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