C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Rho GTPase activating protein 17
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000030766 Arhgap17 10090 - 7:123279150-123369915 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000098060 Arhgap17-201 123279150-123369915 protein_coding
  ENSMUST00000106442 Arhgap17-202 123279150-123369915 protein_coding
  ENSMUST00000167309 Arhgap17-203 123279150-123369915 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000098060ENSMUST00000106442ENSMUST00000167309
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000098060 N/A 4.017±0.34 2.071±0.86 N/A N/A N/A 0.577±0.00 2.120±0.26 1.653±0.57 2.685±0.00 0.734±0.10 3.484±1.61 5.422±3.38 0.465±0.00
ENSMUST00000106442 4.674±2.49 8.924±3.21 1.677±0.52 5.365±1.24 5.262±2.65 10.492±2.86 1.486±0.22 3.713±0.96 1.987±0.91 3.698±1.80 N/A 8.945±3.64 10.094±4.23 1.507±0.25
ENSMUST00000167309 2.122±0.05 3.272±0.83 2.488±0.03 0.741±0.00 3.079±0.77 N/A 0.392±0.00 0.938±0.07 2.042±0.89 1.874±0.08 1.397±0.37 2.625±0.06 3.000±1.24 1.080±0.24

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005KU CIL_0005KU_0002 CGP 7:123214780-123369915
CIL_0003XC CIL_0003XC_0002 CGP 7:123279150-123430358

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005096 IEA GTPase activator activity
GO:0005737 IEA cytoplasm
GO:0005886 IDA plasma membrane
GO:0005923 IEA tight junction
GO:0007165 IEA signal transduction
GO:0017124 IEA SH3 domain binding
GO:0043547 IEA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000020488 arhgap17a Rho GTPase activating protein 17a protein_coding Danio_rerio
ENSDARG00000062263 ARHGAP17 (2 of 3) Rho GTPase activating protein 17 protein_coding Danio_rerio
ENSDARG00000070804 arhgap17b Rho GTPase activating protein 17b protein_coding Danio_rerio
ENSG00000140750 ARHGAP17 Rho GTPase activating protein 17 protein_coding Homo_sapiens

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