C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transforming, acidic coiled-coil containing protein 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000030852 Tacc2 10090 + 7:130577484-130764784 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000033141 Tacc2-201 130692556-130764784 protein_coding
  ENSMUST00000059145 Tacc2-202 130577484-130764784 protein_coding
  ENSMUST00000084513 Tacc2-203 130577484-130764782 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000033141ENSMUST00000059145ENSMUST00000084513
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000033141 2.321±1.09 0.732±0.00 N/A 16.373±6.69 2.404±0.00 N/A N/A N/A 0.241±0.09 N/A N/A 3.763±1.47 N/A 0.573±0.00
ENSMUST00000059145 2.198±0.62 1.944±0.00 6.823±1.10 N/A 2.358±1.60 3.118±0.74 13.105±0.00 5.126±2.19 1.193±0.41 3.526±1.01 26.762±5.59 15.131±0.00 5.878±3.55 N/A
ENSMUST00000084513 N/A N/A 2.665±0.14 N/A 0.984±0.25 0.983±0.14 5.576±1.69 1.138±0.10 0.291±0.09 1.232±0.34 20.039±11.42 1.973±0.33 3.336±1.53 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002WI CIL_0002WI_0002 CGP 7:129591863-133123350
CIL_00095T CIL_00095T_0002 VISTA 7:130125765-130727321
CIL_0001BE CIL_0001BE_0002 CGP 7:130162451-133123350
CIL_00047F CIL_00047F_0003 CGP 7:130532523-130764784
CIL_0001BC CIL_0001BC_0002 CGP 7:130577484-130825897

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000226 IMP microtubule cytoskeleton organization
GO:0005634 IEA nucleus
GO:0005730 IEA nucleolus
GO:0005737 IEA cytoplasm
GO:0005794 IEA Golgi apparatus
GO:0008283 IMP cell proliferation
GO:0019904 IPI protein domain specific binding
GO:0021987 IMP cerebral cortex development
GO:0022008 IMP neurogenesis
GO:0022027 IMP interkinetic nuclear migration
GO:0030953 IDA astral microtubule organization
GO:0032886 IMP regulation of microtubule-based process
GO:0035257 ISO nuclear hormone receptor binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000062790 TACC2 transforming, acidic coiled-coil containing protein 2 protein_coding Danio_rerio
ENSG00000138162 TACC2 transforming, acidic coiled-coil containing protein 2 protein_coding Homo_sapiens

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