C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00047F_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000024311-ENSDARG00000062790 CGP 7955 13:29009416-29125894
GeneTranscriptPositionBiotype
ENSDARG00000024311 (nsmce4a)
non-SMC element 4 homolog A (S. cerevisiae) 		ENSDART00000039028 (nsmce4a-001) 29009416-29020239 protein_coding
ENSDARG00000062790 (TACC2)
transforming, acidic coiled-coil containing protein 2 		ENSDART00000101653 (TACC2-201) 29044014-29125894 protein_coding
CIL_00047F_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000107672-ENSG00000138162 CGP 9606 10:121957088-122254545
GeneTranscriptPositionBiotype
ENSG00000138162 (TACC2)
transforming, acidic coiled-coil containing protein 2 		ENST00000260733 (TACC2-008) 122163844-122254538 protein_coding
ENST00000334433 (TACC2-201) 122021936-122254540 protein_coding
ENST00000358010 (TACC2-202) 122021936-122254540 protein_coding
ENST00000360561 (TACC2-007) 122163426-122254545 protein_coding
ENST00000368997 (TACC2-027) 122210042-122254337 retained_intron
ENST00000368999 (TACC2-010) 122163590-122254483 protein_coding
ENST00000369000 (TACC2-005) 122126714-122254544 protein_coding
ENST00000369001 (TACC2-006) 122113039-122254542 protein_coding
ENST00000369004 (TACC2-009) 122163774-122254545 protein_coding
ENST00000369005 (TACC2-001) 121989194-122254542 protein_coding
ENST00000440764 (TACC2-018) 122210886-122227906 nonsense_mediated_decay
ENST00000453444 (TACC2-203) 122021936-122254540 protein_coding
ENST00000465600 (TACC2-029) 122246473-122254540 retained_intron
ENST00000474014 (TACC2-025) 121994632-122023790 retained_intron
ENST00000489754 (TACC2-026) 122019748-122022231 retained_intron
ENST00000490979 (TACC2-016) 122237959-122254538 protein_coding
ENST00000491540 (TACC2-011) 122021993-122083007 protein_coding
ENST00000492237 (TACC2-021) 122113056-122210523 processed_transcript
ENST00000492689 (TACC2-024) 121989174-122052697 retained_intron
ENST00000493951 (TACC2-020) 122113030-122210569 processed_transcript
ENST00000496913 (TACC2-012) 122211209-122237522 protein_coding
ENST00000498721 (TACC2-019) 121989263-122079145 processed_transcript
ENST00000503769 (TACC2-028) 122241634-122249128 retained_intron
ENST00000505639 (TACC2-017) 122210903-122216665 protein_coding
ENST00000508411 (TACC2-014) 122211686-122226421 protein_coding
ENST00000513429 (TACC2-002) 121989194-122254545 protein_coding
ENST00000514539 (TACC2-015) 122192448-122226480 protein_coding
ENST00000515273 (TACC2-003) 121989206-122254345 protein_coding
ENST00000515603 (TACC2-004) 121989206-122254348 protein_coding
ENSG00000273891 (RP11-500G22.5)
 ENST00000620490 (RP11-500G22.5-001) 121965764-121967700 antisense
CIL_00047F_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000040331-ENSMUSG00000030852 CGP 10090 7:130532523-130764784
GeneTranscriptPositionBiotype
ENSMUSG00000030852 (Tacc2)
transforming, acidic coiled-coil containing protein 2 		ENSMUST00000033141 (Tacc2-201) 130692556-130764784 protein_coding
ENSMUST00000059145 (Tacc2-202) 130577484-130764784 protein_coding
ENSMUST00000084513 (Tacc2-203) 130577484-130764782 protein_coding
ENSMUSG00000040331 (Nsmce4a)
non-SMC element 4 homolog A (S. cerevisiae) 		ENSMUST00000159694 (Nsmce4a-006) 130533770-130573118 protein_coding
ENSMUST00000160289 (Nsmce4a-001) 130532523-130547381 protein_coding
ENSMUST00000161076 (Nsmce4a-003) 130536983-130545954 nonsense_mediated_decay
ENSMUST00000161414 (Nsmce4a-002) 130539708-130542791 retained_intron
ENSMUST00000161470 (Nsmce4a-004) 130535549-130539507 retained_intron
ENSMUST00000162510 (Nsmce4a-005) 130532533-130535973 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00047F_0001ENSDARG00000024311ENSDART00000039028ENSDARG00000062790ENSDART00000101653CIL_00047F_0002ENSG00000138162ENST00000260733ENST00000334433ENST00000358010ENST00000360561ENST00000368997ENST00000368999ENST00000369000ENST00000369001ENST00000369004ENST00000369005ENST00000440764ENST00000453444ENST00000465600ENST00000474014ENST00000489754ENST00000490979ENST00000491540ENST00000492237ENST00000492689ENST00000493951ENST00000496913ENST00000498721ENST00000503769ENST00000505639ENST00000508411ENST00000513429ENST00000514539ENST00000515273ENST00000515603ENSG00000273891ENST00000620490CIL_00047F_0003ENSMUSG00000030852ENSMUST00000033141ENSMUST00000059145ENSMUST00000084513ENSMUSG00000040331ENSMUST00000159694ENSMUST00000160289ENSMUST00000161076ENSMUST00000161414ENSMUST00000161470ENSMUST00000162510
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00047F_0001ENSDARG00000024311ENSDART00000039028ENSDARG00000062790ENSDART00000101653CIL_00047F_0002ENSG00000138162ENST00000260733ENST00000334433ENST00000358010ENST00000360561ENST00000368997ENST00000369000ENST00000369001ENST00000369004ENST00000465600ENST00000496913ENST00000515603ENSG00000273891ENST00000620490CIL_00047F_0003ENSMUSG00000030852ENSMUST00000033141ENSMUST00000059145ENSMUST00000084513ENSMUSG00000040331ENSMUST00000159694ENSMUST00000160289ENSMUST00000161076
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000024311 ENSDART00000039028 N/A N/A N/A 2.475±0.49 N/A N/A 2.660±0.83 6.854±6.90 0.498±0.00 N/A 0.983±0.00 N/A N/A N/A
ENSDARG00000062790 ENSDART00000101653 N/A N/A N/A 31.901±13.24 N/A N/A 2.859±2.60 0.859±0.45 0.198±0.00 N/A 27.115±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000138162 ENST00000260733 N/A N/A N/A 2.168±0.00 8.325±0.00 N/A 15.611±0.00 N/A 0.812±0.00 N/A 67.967±0.00 N/A N/A 4.479±0.00
ENST00000334433 N/A 0.835±0.00 N/A N/A 2.364±0.74 2.937±2.01 4.868±3.58 N/A 0.269±0.00 1.967±0.40 74.349±0.00 1.810±0.00 0.985±0.00 1.522±0.00
ENST00000358010 N/A N/A N/A N/A N/A 1.410±0.00 14.789±0.00 N/A N/A N/A 42.509±0.00 N/A N/A N/A
ENST00000360561 N/A N/A N/A 2.027±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.787±0.00
ENST00000368997 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.513±0.00 1.536±0.00
ENST00000368999 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000369000 N/A N/A N/A N/A N/A N/A N/A 1.300±0.00 N/A N/A N/A N/A N/A N/A
ENST00000369001 4.388±0.00 3.464±0.00 N/A 1.944±0.00 5.385±4.00 13.942±0.00 N/A 21.156±0.00 1.321±0.00 5.333±1.97 N/A 9.752±6.74 5.191±0.58 1.708±0.63
ENST00000369004 N/A N/A N/A 2.017±0.20 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000369005 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000440764 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000453444 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465600 N/A N/A N/A N/A 1.552±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474014 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489754 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490979 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491540 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492237 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492689 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493951 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496913 N/A N/A N/A N/A N/A N/A N/A N/A 1.911±0.00 N/A N/A N/A N/A N/A
ENST00000498721 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503769 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505639 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508411 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513429 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514539 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515273 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515603 N/A 1.062±0.00 1.463±0.00 N/A N/A N/A N/A N/A 2.667±0.00 N/A N/A N/A 3.323±0.72 N/A
ENSG00000273891 ENST00000620490 N/A N/A N/A 0.636±0.00 0.713±0.00 N/A 0.185±0.00 N/A N/A N/A 0.248±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030852 ENSMUST00000033141 2.321±1.09 0.732±0.00 N/A 16.373±6.69 2.404±0.00 N/A N/A N/A 0.241±0.09 N/A N/A 3.763±1.47 N/A 0.573±0.00
ENSMUST00000059145 2.198±0.62 1.944±0.00 6.823±1.10 N/A 2.358±1.60 3.118±0.74 13.105±0.00 5.126±2.19 1.193±0.41 3.526±1.01 26.762±5.59 15.131±0.00 5.878±3.55 N/A
ENSMUST00000084513 N/A N/A 2.665±0.14 N/A 0.984±0.25 0.983±0.14 5.576±1.69 1.138±0.10 0.291±0.09 1.232±0.34 20.039±11.42 1.973±0.33 3.336±1.53 N/A
ENSMUSG00000040331 ENSMUST00000159694 N/A N/A N/A N/A 6.534±0.00 N/A N/A N/A N/A N/A N/A 15.983±0.00 N/A N/A
ENSMUST00000160289 21.569±7.56 35.919±18.42 26.634±1.12 19.159±6.78 19.204±9.44 48.396±6.72 12.025±0.80 26.312±3.53 26.537±16.56 22.366±2.75 15.421±1.42 63.221±19.86 37.131±6.30 7.080±1.90
ENSMUST00000161076 N/A N/A N/A 16.174±0.00 N/A N/A N/A N/A N/A N/A N/A 39.872±0.00 43.166±5.10 N/A
ENSMUST00000161414 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161470 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162510 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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