C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein tyrosine phosphatase, non-receptor type 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000033142 Ptpn5-001 ENSMUSG00000030854 10090 - 7:47077798-47132717 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000033142
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000033142 5.682±0.07 0.095±0.03 0.056±0.03 37.723±12.51 3.678±1.27 0.268±0.08 0.190±0.07 0.026±0.03 0.261±0.16 0.018±0.00 4.707±2.54 0.233±0.46 0.006±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000368 CIL_000368_0002 CGP 7:47077798-47204920

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001784 IEA phosphotyrosine binding
GO:0004725 IMP protein tyrosine phosphatase activity
GO:0005783 IEA endoplasmic reticulum
GO:0006470 IMP protein dephosphorylation
GO:0016021 IEA integral component of membrane
GO:0035335 IEA peptidyl-tyrosine dephosphorylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000358540 PTPN5-001 protein_coding Homo_sapiens 0 2209
ENST00000396166 PTPN5-005 protein_coding Homo_sapiens 0 665
ENST00000396168 PTPN5-006 protein_coding Homo_sapiens 0 2309
ENST00000396170 PTPN5-002 protein_coding Homo_sapiens 0 1840
ENST00000477854 PTPN5-004 protein_coding Homo_sapiens 0 1901
ENST00000496201 PTPN5-007 processed_transcript Homo_sapiens 0 688

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