C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ADP-ribosylation factor interacting protein 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000030881 Arfip2 10090 - 7:105634203-105640416 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000033171 Arfip2-004 105635621-105640314 nonsense_mediated_decay
  ENSMUST00000084782 Arfip2-002 105635657-105640351 protein_coding
  ENSMUST00000126589 Arfip2-007 105637120-105637915 processed_transcript
  ENSMUST00000127759 Arfip2-008 105638587-105640340 retained_intron
  ENSMUST00000127853 Arfip2-006 105635624-105637902 processed_transcript
  ENSMUST00000131446 Arfip2-001 105634203-105640416 protein_coding
  ENSMUST00000133519 Arfip2-010 105637188-105640308 protein_coding
  ENSMUST00000134613 Arfip2-011 105636902-105638045 processed_transcript
  ENSMUST00000137931 Arfip2-003 105635656-105640337 nonsense_mediated_decay
  ENSMUST00000142173 Arfip2-005 105634207-105639914 retained_intron
  ENSMUST00000157028 Arfip2-009 105637848-105640335 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000033171ENSMUST00000084782ENSMUST00000127853ENSMUST00000131446ENSMUST00000134613ENSMUST00000137931ENSMUST00000142173ENSMUST00000157028
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000033171 N/A N/A N/A N/A 17.826±0.00 N/A 12.507±1.88 N/A N/A N/A 23.245±0.07 18.937±2.13
ENSMUST00000084782 22.839±3.92 27.576±8.63 27.741±3.92 17.672±0.00 28.425±2.94 8.443±1.17 22.616±3.78 11.423±1.13 23.847±0.99 10.044±3.81 29.995±6.34 18.537±0.18
ENSMUST00000127853 30.938±5.15 28.538±5.23 N/A 20.189±1.59 N/A 7.280±0.00 N/A N/A 31.094±0.00 8.918±0.00 N/A N/A
ENSMUST00000131446 N/A 11.688±0.00 12.450±0.00 N/A N/A N/A N/A 5.755±0.00 N/A 5.968±0.00 6.802±0.82 5.119±1.07
ENSMUST00000134613 N/A N/A 81.185±0.00 N/A N/A N/A N/A N/A N/A N/A 69.866±0.00 51.594±0.00
ENSMUST00000137931 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 17.923±0.00 16.831±1.90
ENSMUST00000142173 N/A N/A N/A 5.964±0.00 N/A N/A N/A N/A N/A N/A 5.104±0.43 3.451±0.00
ENSMUST00000157028 N/A N/A 51.315±0.00 N/A N/A N/A N/A N/A N/A N/A 45.283±0.00 47.568±7.82

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004A8 CIL_0004A8_0002 CGP 7:105604463-105640416
CIL_0004HY CIL_0004HY_0002 CGP 7:105634203-105655748

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0019904 IEA protein domain specific binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056664 arfip2b ADP-ribosylation factor interacting protein 2b protein_coding Danio_rerio
ENSDARG00000059244 arfip2a ADP-ribosylation factor interacting protein 2a protein_coding Danio_rerio
ENSG00000132254 ARFIP2 ADP-ribosylation factor interacting protein 2 protein_coding Homo_sapiens

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