C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chordin-like 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000031283 Chrdl1 10090 - X:143285674-143394262 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000063029 Chrdl1-001 143285674-143390099 protein_coding
  ENSMUST00000074660 Chrdl1-002 143297174-143394184 protein_coding
  ENSMUST00000112878 Chrdl1-201 143285684-143394262 protein_coding
  ENSMUST00000166406 Chrdl1-202 143297176-143393896 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000063029ENSMUST00000074660ENSMUST00000112878ENSMUST00000166406
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000063029 2.678±0.53 0.414±0.00 4.436±0.14 0.489±0.33 2.849±1.14 0.597±0.18 0.197±0.02 1.047±0.13 0.053±0.02 1.802±0.50 0.217±0.04 1.386±0.48 0.461±0.29 0.294±0.10
ENSMUST00000074660 3.012±0.19 0.553±0.15 3.876±0.18 0.400±0.18 3.172±0.69 1.173±0.43 0.192±0.09 1.135±0.15 0.106±0.03 2.240±0.74 0.267±0.08 1.423±1.09 1.629±0.67 0.275±0.12
ENSMUST00000112878 N/A 0.493±0.27 N/A 0.249±0.00 0.586±0.00 0.313±0.10 N/A N/A 0.051±0.00 1.215±0.00 0.105±0.01 0.596±0.32 N/A 0.111±0.02
ENSMUST00000166406 3.201±1.46 N/A N/A N/A 1.909±0.37 1.188±0.17 0.148±0.04 1.713±0.39 0.066±0.03 1.489±0.20 N/A 1.458±0.72 1.053±0.60 0.524±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00079W CIL_00079W_0002 CGP X:143099594-143394262
CIL_00079V CIL_00079V_0002 CGP X:143285674-143797796

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001503 IEA ossification
GO:0001654 ISS eye development
GO:0005576 IEA extracellular region
GO:0007399 IEA nervous system development
GO:0030154 IEA cell differentiation
GO:0030514 IDA negative regulation of BMP signaling pathway
GO:0048749 ISS compound eye development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000101938 CHRDL1 chordin-like 1 protein_coding Homo_sapiens

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