C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00079W_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000243978-ENSG00000101938 CGP 9606 X:110358816-110795819
GeneTranscriptPositionBiotype
ENSG00000101935 (AMMECR1)
Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 		ENST00000262844 (AMMECR1-001) 110194186-110318239 protein_coding
ENST00000372057 (AMMECR1-002) 110196410-110440233 protein_coding
ENST00000372059 (AMMECR1-005) 110196372-110318084 protein_coding
ENST00000473662 (AMMECR1-003) 110219480-110317771 processed_transcript
ENST00000496695 (AMMECR1-004) 110309150-110317756 processed_transcript
ENSG00000101938 (CHRDL1)
chordin-like 1 		ENST00000372042 (CHRDL1-002) 110675776-110795811 protein_coding
ENST00000372045 (CHRDL1-001) 110673856-110795765 protein_coding
ENST00000394797 (CHRDL1-004) 110675245-110795765 protein_coding
ENST00000444321 (CHRDL1-006) 110676057-110795819 protein_coding
ENST00000482160 (CHRDL1-005) 110675941-110795819 protein_coding
ENSG00000225366 (TDGF1P3)
teratocarcinoma-derived growth factor 1 pseudogene 3 		ENST00000493351 (TDGF1P3-001) 110521130-110521696 transcribed_processed_pseudogene
ENST00000602699 (TDGF1P3-002) 110520312-110523021 processed_transcript
ENSG00000243978 (RGAG1)
retrotransposon gag domain containing 1 		ENST00000465301 (RGAG1-001) 110419057-110456334 protein_coding
ENST00000520821 (RGAG1-003) 110358816-110450881 protein_coding
ENST00000540313 (RGAG1-201) 110450565-110456326 protein_coding
CIL_00079W_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000085584-ENSMUSG00000031283 CGP 10090 X:143099594-143394262
GeneTranscriptPositionBiotype
ENSMUSG00000031283 (Chrdl1)
chordin-like 1 		ENSMUST00000063029 (Chrdl1-001) 143285674-143390099 protein_coding
ENSMUST00000074660 (Chrdl1-002) 143297174-143394184 protein_coding
ENSMUST00000112878 (Chrdl1-201) 143285684-143394262 protein_coding
ENSMUST00000166406 (Chrdl1-202) 143297176-143393896 protein_coding
ENSMUSG00000083089 (Gm4760)
predicted gene 4760 		ENSMUST00000119663 (Gm4760-001) 143183508-143184537 processed_pseudogene
ENSMUSG00000085584 (Rgag1)
retrotransposon gag domain containing 1 		ENSMUST00000165829 (Rgag1-001) 143099594-143104297 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00079W_0001ENSG00000101935ENST00000262844ENST00000372057ENST00000372059ENST00000473662ENST00000496695ENSG00000101938ENST00000372042ENST00000372045ENST00000394797ENST00000444321ENST00000482160ENSG00000225366ENST00000493351ENST00000602699ENSG00000243978ENST00000465301ENST00000520821ENST00000540313CIL_00079W_0002ENSMUSG00000031283ENSMUST00000063029ENSMUST00000074660ENSMUST00000112878ENSMUST00000166406ENSMUSG00000083089ENSMUST00000119663ENSMUSG00000085584ENSMUST00000165829
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00079W_0001ENSG00000101935ENST00000262844ENST00000372059ENSG00000101938ENST00000372042ENST00000372045ENST00000394797ENST00000444321ENST00000482160ENSG00000225366ENST00000493351ENST00000602699ENSG00000243978ENST00000465301ENST00000540313CIL_00079W_0002ENSMUSG00000031283ENSMUST00000063029ENSMUST00000074660ENSMUST00000112878ENSMUST00000166406ENSMUSG00000083089ENSMUST00000119663ENSMUSG00000085584ENSMUST00000165829
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000101935 ENST00000262844 0.646±0.00 0.823±0.00 0.459±0.00 0.125±0.00 0.638±0.53 0.368±0.00 0.276±0.14 0.638±0.13 0.331±0.06 0.869±0.62 N/A 1.737±0.42 2.475±0.64 0.418±0.00
ENST00000372057 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000372059 N/A N/A 0.368±0.00 N/A 0.471±0.00 0.676±0.00 0.203±0.00 1.168±0.00 N/A N/A 0.557±0.00 N/A N/A N/A
ENST00000473662 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496695 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000101938 ENST00000372042 N/A N/A 0.334±0.00 N/A 6.156±0.00 0.991±0.00 0.234±0.00 N/A N/A 2.827±0.00 0.704±0.00 N/A N/A N/A
ENST00000372045 1.990±0.00 3.068±0.00 N/A 2.566±0.00 12.668±11.39 9.783±0.00 N/A N/A 2.022±0.00 6.327±0.00 N/A 1.260±0.03 0.444±0.00 2.337±0.00
ENST00000394797 N/A N/A N/A 0.925±0.00 N/A N/A N/A 0.380±0.00 N/A N/A 0.794±0.00 N/A N/A N/A
ENST00000444321 N/A N/A N/A N/A N/A 2.515±0.00 0.484±0.00 0.549±0.00 6.854±0.00 N/A N/A N/A N/A N/A
ENST00000482160 N/A N/A 0.148±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000225366 ENST00000493351 N/A N/A N/A N/A N/A N/A 0.085±0.00 0.512±0.00 N/A 0.038±0.00 N/A 0.140±0.04 N/A N/A
ENST00000602699 0.032±0.00 0.097±0.00 N/A 0.041±0.00 0.030±0.00 0.020±0.00 0.023±0.00 0.015±0.00 0.008±0.00 N/A 0.027±0.00 0.015±0.00 N/A 0.069±0.00
ENSG00000243978 ENST00000465301 N/A N/A N/A N/A N/A N/A 0.149±0.00 N/A N/A N/A N/A 0.604±0.00 N/A N/A
ENST00000520821 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540313 0.020±0.00 N/A N/A 0.157±0.05 0.033±0.00 0.013±0.01 0.094±0.00 0.009±0.00 0.060±0.00 N/A 0.026±0.00 0.197±0.12 0.281±0.01 2.177±0.42
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031283 ENSMUST00000063029 2.678±0.53 0.414±0.00 4.436±0.14 0.489±0.33 2.849±1.14 0.597±0.18 0.197±0.02 1.047±0.13 0.053±0.02 1.802±0.50 0.217±0.04 1.386±0.48 0.461±0.29 0.294±0.10
ENSMUST00000074660 3.012±0.19 0.553±0.15 3.876±0.18 0.400±0.18 3.172±0.69 1.173±0.43 0.192±0.09 1.135±0.15 0.106±0.03 2.240±0.74 0.267±0.08 1.423±1.09 1.629±0.67 0.275±0.12
ENSMUST00000112878 N/A 0.493±0.27 N/A 0.249±0.00 0.586±0.00 0.313±0.10 N/A N/A 0.051±0.00 1.215±0.00 0.105±0.01 0.596±0.32 N/A 0.111±0.02
ENSMUST00000166406 3.201±1.46 N/A N/A N/A 1.909±0.37 1.188±0.17 0.148±0.04 1.713±0.39 0.066±0.03 1.489±0.20 N/A 1.458±0.72 1.053±0.60 0.524±0.10
ENSMUSG00000083089 ENSMUST00000119663 N/A N/A N/A N/A 0.049±0.02 N/A N/A 0.029±0.00 N/A 0.030±0.00 N/A N/A N/A 0.095±0.06
ENSMUSG00000085584 ENSMUST00000165829 0.224±0.06 0.088±0.04 N/A 0.233±0.00 0.115±0.05 0.061±0.04 0.058±0.03 0.017±0.01 0.009±0.00 0.134±0.04 0.041±0.01 0.156±0.08 0.053±0.02 0.016±0.00

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