C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chordin-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000074660 Chrdl1-002 ENSMUSG00000031283 10090 - X:143297174-143394184 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000074660
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000074660 3.012±0.19 0.553±0.15 3.876±0.18 0.400±0.18 3.172±0.69 1.173±0.43 0.192±0.09 1.135±0.15 0.106±0.03 2.240±0.74 0.267±0.08 1.423±1.09 1.629±0.67 0.275±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00079W CIL_00079W_0002 CGP X:143099594-143394262
CIL_00079V CIL_00079V_0002 CGP X:143285674-143797796

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001503 IEA ossification
GO:0001654 ISS eye development
GO:0005576 IEA extracellular region
GO:0007399 IEA nervous system development
GO:0030154 IEA cell differentiation
GO:0030514 IDA negative regulation of BMP signaling pathway
GO:0048749 ISS compound eye development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000372042 CHRDL1-002 protein_coding Homo_sapiens 0 1284
ENST00000372045 CHRDL1-001 protein_coding Homo_sapiens 0 1297
ENST00000394797 CHRDL1-004 protein_coding Homo_sapiens 0 1297
ENST00000444321 CHRDL1-006 protein_coding Homo_sapiens 0 1297
ENST00000482160 CHRDL1-005 protein_coding Homo_sapiens 0 608

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