C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chordin-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000063029 Chrdl1-001 ENSMUSG00000031283 10090 - X:143285674-143390099 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000063029
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000063029 2.678±0.53 0.414±0.00 4.436±0.14 0.489±0.33 2.849±1.14 0.597±0.18 0.197±0.02 1.047±0.13 0.053±0.02 1.802±0.50 0.217±0.04 1.386±0.48 0.461±0.29 0.294±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00079W CIL_00079W_0002 CGP X:143099594-143394262
CIL_00079V CIL_00079V_0002 CGP X:143285674-143797796

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001503 IEA ossification
GO:0001654 ISS eye development
GO:0005576 IEA extracellular region
GO:0007399 IEA nervous system development
GO:0030154 IEA cell differentiation
GO:0030514 IDA negative regulation of BMP signaling pathway
GO:0048749 ISS compound eye development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000372042 CHRDL1-002 protein_coding Homo_sapiens 0 1685
ENST00000372045 CHRDL1-001 protein_coding Homo_sapiens 0 1707
ENST00000394797 CHRDL1-004 protein_coding Homo_sapiens 0 1707
ENST00000444321 CHRDL1-006 protein_coding Homo_sapiens 0 1700
ENST00000482160 CHRDL1-005 protein_coding Homo_sapiens 0 1018

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