C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: doublecortin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000033642 Dcx-001 ENSMUSG00000031285 10090 - X:143855842-143933311 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000033642
Transcript ID Adipose Adrenal Bladder Brain Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000033642 0.008±0.00 0.022±0.00 0.013±0.00 83.696±24.77 0.020±0.01 0.011±0.00 0.049±0.05 0.009±0.00 0.005±0.00 0.042±0.02 0.006±0.00 0.009±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00068U CIL_00068U_0002 CGP X:143802231-143933311

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001764 IGI neuron migration
GO:0005515 IPI protein binding
GO:0005622 IDA intracellular
GO:0005737 IEA cytoplasm
GO:0005874 IEA microtubule
GO:0007420 IGI brain development
GO:0008017 ISS microtubule binding
GO:0019901 IEA protein kinase binding
GO:0021952 IGI central nervous system projection neuron axonogenesis
GO:0035556 IEA intracellular signal transduction
GO:0043005 ISS neuron projection
GO:0048675 IGI axon extension
GO:0048813 IGI dendrite morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000338081 DCX-006 protein_coding Homo_sapiens 0 2466
ENST00000356220 DCX-004 protein_coding Homo_sapiens 0 2521
ENST00000358070 DCX-002 protein_coding Homo_sapiens 0 2558
ENST00000371993 DCX-201 protein_coding Homo_sapiens 0 2466
ENST00000468911 DCX-005 protein_coding Homo_sapiens 0 453
ENST00000488120 DCX-001 protein_coding Homo_sapiens 0 2250
ENST00000496551 DCX-003 processed_transcript Homo_sapiens 0 1271

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