C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: gamma-aminobutyric acid (GABA) A receptor, subunit theta
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000031344 Gabrq 10090 + X:72825178-72842602 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000033711 Gabrq-001 72825436-72838544 protein_coding
  ENSMUST00000114553 Gabrq-002 72825178-72842602 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000033711ENSMUST00000114553
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000033711 0.027±0.00 N/A 0.076±0.00 N/A 0.070±0.05 0.031±0.00 0.070±0.00 0.015±0.00 N/A 0.056±0.00 0.016±0.00 0.148±0.08 0.013±0.00 0.055±0.01
ENSMUST00000114553 0.088±0.02 0.149±0.03 0.087±0.04 0.730±0.24 0.059±0.03 0.031±0.01 0.041±0.02 0.018±0.00 0.017±0.01 0.209±0.09 0.012±0.01 0.196±0.09 0.014±0.00 0.031±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000115 CIL_000115_0002 CGP X:72432681-72842602

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004890 ISS GABA-A receptor activity
GO:0005230 IEA extracellular ligand-gated ion channel activity
GO:0005254 IEA chloride channel activity
GO:0005887 ISS integral component of plasma membrane
GO:0006821 ISS chloride transport
GO:0007214 ISS gamma-aminobutyric acid signaling pathway
GO:0030054 IEA cell junction
GO:0034220 IEA ion transmembrane transport
GO:0034707 IEA chloride channel complex
GO:0043235 ISO receptor complex
GO:0045202 IEA synapse
GO:0045211 IEA postsynaptic membrane
GO:1902476 IEA chloride transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000268089 GABRQ gamma-aminobutyric acid (GABA) A receptor, theta protein_coding Homo_sapiens

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