C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: gamma-aminobutyric acid (GABA) A receptor, subunit theta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000033711 Gabrq-001 ENSMUSG00000031344 10090 + X:72825436-72838544 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENSMUST00000033711
Transcript ID Adipose Bladder Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENSMUST00000033711 0.027±0.00 0.076±0.00 0.070±0.05 0.031±0.00 0.070±0.00 0.015±0.00 0.056±0.00 0.016±0.00 0.148±0.08 0.013±0.00 0.055±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000115 CIL_000115_0002 CGP X:72432681-72842602

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004890 ISS GABA-A receptor activity
GO:0005230 IEA extracellular ligand-gated ion channel activity
GO:0005254 IEA chloride channel activity
GO:0005887 ISS integral component of plasma membrane
GO:0006821 ISS chloride transport
GO:0007214 ISS gamma-aminobutyric acid signaling pathway
GO:0030054 IEA cell junction
GO:0034707 IEA chloride channel complex
GO:0043235 ISO receptor complex
GO:0045211 IEA postsynaptic membrane
GO:1902476 IEA chloride transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000598523 GABRQ-001 protein_coding Homo_sapiens 0 1476

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