C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: gamma-aminobutyric acid (GABA) A receptor, subunit theta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000114553 Gabrq-002 ENSMUSG00000031344 10090 + X:72825178-72842602 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000114553
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000114553 0.088±0.02 0.149±0.03 0.087±0.04 0.730±0.24 0.059±0.03 0.031±0.01 0.041±0.02 0.018±0.00 0.017±0.01 0.209±0.09 0.012±0.01 0.196±0.09 0.014±0.00 0.031±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000115 CIL_000115_0002 CGP X:72432681-72842602

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004890 ISS GABA-A receptor activity
GO:0005230 IEA extracellular ligand-gated ion channel activity
GO:0005887 ISS integral component of plasma membrane
GO:0006821 ISS chloride transport
GO:0007214 ISS gamma-aminobutyric acid signaling pathway
GO:0030054 IEA cell junction
GO:0034220 IEA ion transmembrane transport
GO:0043235 ISO receptor complex
GO:0045202 IEA synapse

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000598523 GABRQ-001 protein_coding Homo_sapiens 0 1319

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