| Transcript ID | Brain | Colon | Liver | Testis |
|---|---|---|---|---|
| ENSMUST00000033882 | 0.325±0.21 | 0.062±0.02 | 0.058±0.01 | 0.029±0.01 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Gene Info | |||||
|---|---|---|---|---|---|
| Description: | cholinergic receptor, nicotinic, alpha polypeptide 6 | ||||
| Gene Accession | Gene Name | Tax ID | Strand | Position | Gene Biotype |
ENSMUSG00000031491  |
Chrna6 | 10090 | - |
8:27403214-27413944  |
protein_coding |
| Transcript Accession | Transcript Name | Position | Transcript Biotype | ||
| ENSMUST00000033882 |
Chrna6-201 | 27403214-27413944 | protein_coding | ||
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0009C5 | CIL_0009C5_0002 | VISTA | 8:26806327-27408431 |
| CIL_0007QT | CIL_0007QT_0002 | VISTA | 8:26806345-27408424 |
| CIL_0002IT | CIL_0002IT_0002 | CGP | 8:27368711-27413944 |
Gene Ontology |
||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0004889 | IMP | acetylcholine-activated cation-selective channel activity |
| GO:0005515 | IPI | protein binding |
| GO:0005892 | IDA | acetylcholine-gated channel complex |
| GO:0006812 | IMP | cation transport |
| GO:0014059 | IMP | regulation of dopamine secretion |
| GO:0030054 | IEA | cell junction |
| GO:0045211 | IEA | postsynaptic membrane |
| GO:0051899 | IMP | membrane depolarization |
| GO:0098655 | IEA | cation transmembrane transport |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Description | Biotype | Species | |
|
ENSDARG00000055559
|
chrna6 | cholinergic receptor, nicotinic, alpha 6 | protein_coding | Danio_rerio | |
|
ENSG00000147434
|
CHRNA6 | cholinergic receptor, nicotinic, alpha 6 (neuronal) | protein_coding | Homo_sapiens | |
