C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: pericentriolar material 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000031592 Pcm1 10090 + 8:41239759-41334086 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000045218 Pcm1-201 41239759-41334086 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000045218
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000045218 2.453±1.24 1.478±0.36 6.973±0.29 14.739±2.93 2.005±0.14 1.334±0.33 2.569±0.23 2.036±0.79 2.540±1.60 2.905±1.56 3.841±0.68 4.692±3.94 5.584±2.68 4.603±0.79

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004EN CIL_0004EN_0002 CGP 8:41191434-41334086
CIL_000072 CIL_000072_0003 CGP 8:41239759-41374773

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000242 IDA pericentriolar material
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005813 IDA centrosome
GO:0016020 IEA membrane
GO:0022027 IMP interkinetic nuclear migration
GO:0031122 IEA cytoplasmic microtubule organization
GO:0031965 IEA nuclear membrane
GO:0034451 IDA centriolar satellite
GO:0034453 IMP microtubule anchoring
GO:0034454 IMP microtubule anchoring at centrosome
GO:0035735 ISS intraciliary transport involved in cilium morphogenesis
GO:0036064 IDA ciliary basal body
GO:0042384 ISS cilium assembly
GO:0043234 ISO protein complex
GO:0050768 IMP negative regulation of neurogenesis
GO:0051297 IEA centrosome organization
GO:0071539 IMP protein localization to centrosome
GO:0090316 ISS positive regulation of intracellular protein transport
GO:0097150 IMP neuronal stem cell maintenance

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000062198 pcm1 pericentriolar material 1 protein_coding Danio_rerio
ENSG00000078674 PCM1 pericentriolar material 1 protein_coding Homo_sapiens

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