C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004EN_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000104760-ENSG00000078674 CGP 9606 8:17864380-18029944
GeneTranscriptPositionBiotype
ENSG00000078674 (PCM1)
pericentriolar material 1 		ENST00000325083 (PCM1-001) 17922840-18027968 protein_coding
ENST00000327578 (PCM1-201) 17922857-18029944 protein_coding
ENST00000517545 (PCM1-006) 17922990-17927953 retained_intron
ENST00000517730 (PCM1-002) 17922990-17960103 protein_coding
ENST00000517836 (PCM1-012) 17957658-17962213 retained_intron
ENST00000518537 (PCM1-005) 17922999-17955955 protein_coding
ENST00000518762 (PCM1-014) 17960094-17964770 processed_transcript
ENST00000518877 (PCM1-020) 18013882-18025611 retained_intron
ENST00000518930 (PCM1-009) 17922968-17953035 processed_transcript
ENST00000518936 (PCM1-008) 17923006-17937321 processed_transcript
ENST00000518985 (PCM1-010) 17937176-17939016 processed_transcript
ENST00000519253 (PCM1-003) 17923028-18027803 protein_coding
ENST00000519802 (PCM1-023) 18013828-18027758 retained_intron
ENST00000521338 (PCM1-022) 18006054-18009665 retained_intron
ENST00000522275 (PCM1-016) 17972583-18027747 protein_coding
ENST00000522777 (PCM1-015) 17980221-17983281 retained_intron
ENST00000522998 (PCM1-024) 17972673-17986263 retained_intron
ENST00000523055 (PCM1-007) 17923010-17953123 protein_coding
ENST00000523540 (PCM1-011) 17969423-17972642 retained_intron
ENST00000523896 (PCM1-017) 18024951-18027758 retained_intron
ENST00000524203 (PCM1-019) 18013988-18015795 processed_transcript
ENST00000524226 (PCM1-004) 17924744-18027975 protein_coding
ENST00000524356 (PCM1-013) 17962953-17966035 retained_intron
ENSG00000253215 (RP11-156K13.2)
 ENST00000519368 (RP11-156K13.2-001) 17882043-17882661 antisense
ENSG00000254054 (RP11-156K13.3)
 ENST00000519038 (RP11-156K13.3-001) 17905756-17907887 lincRNA
CIL_0004EN_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031594-ENSMUSG00000031592 CGP 10090 8:41191434-41334086
GeneTranscriptPositionBiotype
ENSMUSG00000031592 (Pcm1)
pericentriolar material 1 		ENSMUST00000045218 (Pcm1-201) 41239759-41334086 protein_coding
ENSMUSG00000031594 (Fgl1)
fibrinogen-like protein 1 		ENSMUST00000034003 (Fgl1-001) 41191434-41215156 protein_coding
ENSMUST00000134510 (Fgl1-002) 41197576-41215153 retained_intron
ENSMUSG00000085445 (Gm16348)
predicted gene 16348 		ENSMUST00000142897 (Gm16348-002) 41218140-41220521 processed_transcript
ENSMUST00000146654 (Gm16348-001) 41218139-41220894 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004EN_0001ENSG00000078674ENST00000325083ENST00000327578ENST00000517545ENST00000517730ENST00000517836ENST00000518537ENST00000518762ENST00000518877ENST00000518930ENST00000518936ENST00000518985ENST00000519253ENST00000519802ENST00000521338ENST00000522275ENST00000522777ENST00000522998ENST00000523055ENST00000523540ENST00000523896ENST00000524203ENST00000524226ENST00000524356ENSG00000253215ENST00000519368ENSG00000254054ENST00000519038CIL_0004EN_0002ENSMUSG00000031592ENSMUST00000045218ENSMUSG00000031594ENSMUST00000034003ENSMUST00000134510ENSMUSG00000085445ENSMUST00000142897ENSMUST00000146654
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004EN_0001ENSG00000078674ENST00000325083ENST00000327578ENST00000517730ENST00000519253ENST00000522275ENST00000524226ENSG00000253215ENST00000519368ENSG00000254054ENST00000519038CIL_0004EN_0002ENSMUSG00000031592ENSMUST00000045218ENSMUSG00000031594ENSMUST00000034003ENSMUST00000134510ENSMUSG00000085445ENSMUST00000142897ENSMUST00000146654
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000078674 ENST00000325083 3.070±0.00 N/A 4.016±0.00 4.907±0.00 1.884±0.00 6.866±0.63 N/A N/A 5.571±4.65 8.052±0.00 5.969±0.00 6.041±2.95 2.154±1.11 N/A
ENST00000327578 3.069±0.00 4.010±0.00 2.143±0.00 4.044±0.00 2.574±0.00 3.145±0.00 N/A 1.478±0.00 2.161±1.36 4.067±0.00 6.281±0.00 N/A N/A N/A
ENST00000517545 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000517730 N/A N/A N/A N/A N/A N/A N/A 5.830±0.00 N/A N/A N/A N/A N/A N/A
ENST00000517836 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518537 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518762 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518877 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518930 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518936 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518985 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519253 4.415±0.00 2.383±0.00 2.687±0.00 4.992±0.19 6.439±3.15 5.496±1.59 7.353±3.23 4.376±0.95 4.097±2.51 6.570±1.77 23.923±0.00 3.729±0.83 2.628±1.97 53.155±26.71
ENST00000519802 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521338 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522275 5.261±0.00 10.703±0.00 N/A N/A 8.744±0.00 N/A 7.844±0.00 8.614±0.00 4.917±0.00 3.843±0.00 33.984±0.00 12.248±4.32 9.219±9.28 111.170±61.94
ENST00000522777 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522998 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523055 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523540 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523896 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524203 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524226 N/A N/A N/A N/A 2.309±0.00 N/A 3.462±0.00 N/A N/A 1.289±0.00 N/A N/A N/A N/A
ENST00000524356 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000253215 ENST00000519368 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.072±0.00 N/A N/A
ENSG00000254054 ENST00000519038 N/A 0.110±0.00 N/A 0.060±0.00 N/A N/A N/A 0.113±0.00 0.399±0.00 N/A N/A N/A 0.174±0.02 1.045±0.41
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031592 ENSMUST00000045218 2.453±1.24 1.478±0.36 6.973±0.29 14.739±2.93 2.005±0.14 1.334±0.33 2.569±0.23 2.036±0.79 2.540±1.60 2.905±1.56 3.841±0.68 4.692±3.94 5.584±2.68 4.603±0.79
ENSMUSG00000031594 ENSMUST00000034003 0.290±0.25 N/A 0.125±0.00 0.143±0.02 0.107±0.06 0.154±0.04 0.062±0.03 0.410±0.15 113.905±120.81 0.100±0.02 0.040±0.00 0.583±0.63 0.633±0.71 0.130±0.13
ENSMUST00000134510 0.020±0.00 N/A N/A 0.004±0.00 N/A N/A N/A N/A N/A N/A N/A 0.155±0.00 0.006±0.00 N/A
ENSMUSG00000085445 ENSMUST00000142897 0.245±0.11 N/A 0.106±0.02 0.083±0.02 0.174±0.09 0.421±0.17 N/A 0.234±0.02 0.452±0.41 N/A 0.068±0.00 0.152±0.02 0.153±0.11 N/A
ENSMUST00000146654 0.415±0.12 0.755±0.27 0.050±0.00 0.073±0.04 0.330±0.10 0.727±0.21 0.260±0.10 0.542±0.08 0.497±0.38 1.053±0.12 0.019±0.01 2.510±1.48 0.077±0.04 0.317±0.16

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