C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000031608 Galnt7 10090 - 8:57523828-57653032 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000034021 Galnt7-001 57523828-57653031 protein_coding
  ENSMUST00000110316 Galnt7-002 57524700-57653003 protein_coding
  ENSMUST00000139417 Galnt7-004 57526024-57538453 processed_transcript
  ENSMUST00000156907 Galnt7-003 57541995-57653032 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034021ENSMUST00000110316ENSMUST00000139417ENSMUST00000156907
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034021 0.904±0.58 0.955±0.00 4.727±0.41 0.908±0.39 1.032±0.29 17.273±3.54 0.794±0.19 0.938±0.41 1.056±0.89 1.285±0.17 0.531±0.12 2.606±1.55 4.590±1.94 0.929±0.61
ENSMUST00000110316 1.113±0.69 N/A 1.262±0.05 1.084±0.00 0.848±0.38 5.944±1.26 0.512±0.07 0.725±0.22 0.523±0.17 0.609±0.22 0.196±0.03 2.027±0.86 1.877±0.97 1.311±0.05
ENSMUST00000139417 N/A N/A N/A 2.344±0.00 1.383±0.33 N/A N/A 0.859±0.00 0.295±0.00 0.966±0.00 N/A N/A N/A N/A
ENSMUST00000156907 N/A N/A N/A N/A 0.578±0.19 N/A N/A N/A 0.160±0.03 N/A N/A 1.105±0.05 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008BZ CIL_0008BZ_0002 VISTA 8:57035224-57635792
CIL_0008VG CIL_0008VG_0002 VISTA 8:57047180-57651136

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004653 IDA polypeptide N-acetylgalactosaminyltransferase activity
GO:0005794 IEA Golgi apparatus
GO:0006493 IDA protein O-linked glycosylation
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0030246 IEA carbohydrate binding
GO:0046872 IEA metal ion binding
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000057303 galnt7 UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7 protein_coding Danio_rerio
ENSG00000109586 GALNT7 polypeptide N-acetylgalactosaminyltransferase 7 protein_coding Homo_sapiens

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