C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: polypeptide N-acetylgalactosaminyltransferase 7
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000109586 GALNT7 9606 + 4:173168753-173323967 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000265000 GALNT7-001 173168753-173323967 protein_coding
  ENST00000502407 GALNT7-007 173282435-173295760 processed_transcript
  ENST00000503213 GALNT7-005 173304019-173318660 protein_coding
  ENST00000505308 GALNT7-003 173292131-173322011 protein_coding
  ENST00000506317 GALNT7-006 173298036-173314037 retained_intron
  ENST00000512285 GALNT7-004 173168811-173298371 protein_coding
  ENST00000515862 GALNT7-002 173315841-173323127 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000265000ENST00000503213ENST00000505308ENST00000506317ENST00000512285ENST00000515862
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000265000 1.022±0.00 1.099±0.00 N/A 0.669±0.22 2.263±0.73 3.814±0.32 0.588±0.51 2.138±1.97 N/A 1.668±0.04 0.113±0.08 3.815±1.47 3.748±1.39 2.933±0.75
ENST00000503213 N/A N/A N/A N/A N/A N/A N/A 1.277±0.00 N/A N/A N/A N/A N/A N/A
ENST00000505308 0.943±0.00 N/A N/A 1.114±0.00 N/A N/A N/A N/A 1.189±0.00 N/A N/A 2.903±0.00 N/A 2.166±0.00
ENST00000506317 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.081±0.00 16.447±0.00 6.858±0.00 N/A
ENST00000512285 N/A N/A 0.543±0.00 N/A 2.467±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515862 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.112±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00007Y CIL_00007Y_0002 CGP 4:171812254-173323967
CIL_00007T CIL_00007T_0002 CGP 4:173168753-173335125

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0004653 IEA polypeptide N-acetylgalactosaminyltransferase activity
GO:0005975 TAS carbohydrate metabolic process
GO:0006493 TAS protein O-linked glycosylation
GO:0008152 IEA metabolic process
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0016266 TAS O-glycan processing
GO:0016757 IEA transferase activity, transferring glycosyl groups
GO:0030246 IEA carbohydrate binding
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process
GO:0046872 IEA metal ion binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000057303 galnt7 UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7 protein_coding Danio_rerio
ENSMUSG00000031608 Galnt7 UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7 protein_coding Mus_musculus

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