C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SH3 domain containing ring finger 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000031642 Sh3rf1 10090 + 8:61224171-61396072 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000034060 Sh3rf1-201 61224171-61396072 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034060
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034060 5.171±1.63 6.350±0.25 6.810±0.04 8.738±2.81 4.238±1.76 11.533±0.59 1.510±0.10 6.421±1.74 0.729±0.13 11.135±0.81 0.335±0.04 7.879±2.48 2.468±0.59 1.057±0.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006KO CIL_0006KO_0002 CGP 8:60993195-61396072

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005829 IEA cytosol
GO:0008270 IEA zinc ion binding
GO:0043066 IEA negative regulation of apoptotic process
GO:0043154 IEA negative regulation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0046328 IEA regulation of JNK cascade
GO:2001237 IEA negative regulation of extrinsic apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070470 sh3rf1 SH3 domain containing ring finger 1 protein_coding Danio_rerio
ENSG00000154447 SH3RF1 SH3 domain containing ring finger 1 protein_coding Homo_sapiens

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