C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transportin 2 (importin 3, karyopherin beta 2b)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000031691 Tnpo2 10090 + 8:85036915-85057583 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000093360 Tnpo2-201 85036915-85057583 protein_coding
  ENSMUST00000166592 Tnpo2-202 85037168-85057583 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000093360ENSMUST00000166592
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000093360 16.212±2.22 27.606±4.81 18.805±0.22 36.315±12.82 20.413±2.10 16.106±5.41 4.770±2.92 9.402±2.25 10.819±3.92 17.546±6.10 3.372±0.67 27.300±10.52 19.107±11.67 6.159±3.28
ENSMUST00000166592 4.698±0.38 N/A 5.885±0.00 N/A 7.918±0.00 N/A N/A N/A 5.884±0.38 N/A 4.443±0.00 10.427±2.28 N/A 6.102±0.37

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VV CIL_0007VV_0002 VISTA 8:84441926-85045230

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006886 IEA intracellular protein transport
GO:0008536 IEA Ran GTPase binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000038239 tnpo2 transportin 2 (importin 3, karyopherin beta 2b) protein_coding Danio_rerio
ENSDARG00000042887 TNPO2 (2 of 2) transportin 2 protein_coding Danio_rerio
ENSG00000105576 TNPO2 transportin 2 protein_coding Homo_sapiens

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