C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transportin 2 (importin 3, karyopherin beta 2b)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000093360 Tnpo2-201 ENSMUSG00000031691 10090 + 8:85036915-85057583 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000093360
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000093360 16.212±2.22 27.606±4.81 18.805±0.22 36.315±12.82 20.413±2.10 16.106±5.41 4.770±2.92 9.402±2.25 10.819±3.92 17.546±6.10 3.372±0.67 27.300±10.52 19.107±11.67 6.159±3.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VV CIL_0007VV_0002 VISTA 8:84441926-85045230

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006886 IEA intracellular protein transport
GO:0008536 IEA Ran GTPase binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000356861 TNPO2-004 protein_coding Homo_sapiens 0 3168
ENST00000425528 TNPO2-201 protein_coding Homo_sapiens 0 4270
ENST00000450764 TNPO2-005 protein_coding Homo_sapiens 0 3201
ENST00000585886 TNPO2-007 non_stop_decay Homo_sapiens 0 3158
ENST00000586775 TNPO2-010 nonsense_mediated_decay Homo_sapiens 0 640
ENST00000587068 TNPO2-014 retained_intron Homo_sapiens 0 287
ENST00000587155 TNPO2-015 retained_intron Homo_sapiens 0 272
ENST00000587654 TNPO2-020 nonsense_mediated_decay Homo_sapiens 0 494
ENST00000588151 TNPO2-011 retained_intron Homo_sapiens 0 664
ENST00000588216 TNPO2-001 protein_coding Homo_sapiens 0 3168
ENST00000588484 TNPO2-019 retained_intron Homo_sapiens 0 710
ENST00000588491 TNPO2-012 nonsense_mediated_decay Homo_sapiens 0 505
ENST00000589149 TNPO2-017 protein_coding Homo_sapiens 0 505
ENST00000589337 TNPO2-016 protein_coding Homo_sapiens 0 387
ENST00000589572 TNPO2-013 nonsense_mediated_decay Homo_sapiens 0 507
ENST00000589956 TNPO2-018 processed_transcript Homo_sapiens 0 551
ENST00000590781 TNPO2-009 protein_coding Homo_sapiens 0 272
ENST00000592287 TNPO2-002 protein_coding Homo_sapiens 0 3879

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