C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: glutamic pyruvate transaminase (alanine aminotransferase) 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000031700 Gpt2 10090 + 8:85492576-85527560 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000034136 Gpt2-001 85492576-85527560 protein_coding
  ENSMUST00000132932 Gpt2-002 85492607-85524834 nonsense_mediated_decay
  ENSMUST00000140189 Gpt2-004 85515977-85521494 retained_intron
  ENSMUST00000143659 Gpt2-003 85492609-85493307 processed_transcript
  ENSMUST00000143846 Gpt2-005 85519409-85525680 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034136ENSMUST00000143659
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034136 64.481±30.59 48.046±10.51 13.586±1.37 9.412±2.78 29.932±4.18 10.984±0.88 10.081±0.81 28.959±2.08 48.592±38.65 5.475±0.64 76.624±6.72 22.285±4.74 8.310±8.50 7.068±2.27
ENSMUST00000143659 N/A 103.797±28.77 N/A N/A 36.414±2.02 10.126±2.68 N/A N/A N/A 6.021±0.00 N/A 29.444±7.23 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00044Y CIL_00044Y_0003 CGP 8:85408759-85527560
CIL_000451 CIL_000451_0003 CGP 8:85492576-85555271

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004021 ISS L-alanine:2-oxoglutarate aminotransferase activity
GO:0005739 IDA mitochondrion
GO:0006103 ISS 2-oxoglutarate metabolic process
GO:0009058 IEA biosynthetic process
GO:0030170 IEA pyridoxal phosphate binding
GO:0042851 ISS L-alanine metabolic process
GO:0042853 IEA L-alanine catabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000012199 gpt2 glutamic pyruvate transaminase (alanine aminotransferase) 2 protein_coding Danio_rerio
ENSG00000166123 GPT2 glutamic pyruvate transaminase (alanine aminotransferase) 2 protein_coding Homo_sapiens

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