C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glutamic pyruvate transaminase (alanine aminotransferase) 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000034136 Gpt2-001 ENSMUSG00000031700 10090 + 8:85492576-85527560 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034136
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034136 64.481±30.59 48.046±10.51 13.586±1.37 9.412±2.78 29.932±4.18 10.984±0.88 10.081±0.81 28.959±2.08 48.592±38.65 5.475±0.64 76.624±6.72 22.285±4.74 8.310±8.50 7.068±2.27

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00044Y CIL_00044Y_0003 CGP 8:85408759-85527560
CIL_000451 CIL_000451_0003 CGP 8:85492576-85555271

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004021 ISS L-alanine:2-oxoglutarate aminotransferase activity
GO:0005739 IDA mitochondrion
GO:0006103 ISS 2-oxoglutarate metabolic process
GO:0009058 IEA biosynthetic process
GO:0030170 IEA pyridoxal phosphate binding
GO:0042851 ISS L-alanine metabolic process
GO:0042853 IEA L-alanine catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000340124 GPT2-001 protein_coding Homo_sapiens 0 1923
ENST00000394955 GPT-201 protein_coding Homo_sapiens 0 259
ENST00000440783 GPT2-002 protein_coding Homo_sapiens 0 1631
ENST00000527165 GPT-003 retained_intron Homo_sapiens 2e-23 115
ENST00000528431 GPT-001 protein_coding Homo_sapiens 0 259
ENST00000534702 GPT-004 retained_intron Homo_sapiens 4e-18 97
ENST00000562801 GPT2-006 retained_intron Homo_sapiens 0 992
ENST00000569193 GPT2-003 retained_intron Homo_sapiens 0 442

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