C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: polyamine modulated factor 1 binding protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000031727 Pmfbp1 10090 + 8:109494027-109542642 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000034162 Pmfbp1-201 109494027-109542642 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034162
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034162 0.026±0.01 0.020±0.00 0.476±0.20 0.030±0.01 0.021±0.00 0.020±0.00 0.017±0.01 0.012±0.02 0.018±0.01 0.011±0.00 0.091±0.04 0.009±0.00 150.902±183.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008FG CIL_0008FG_0002 VISTA 8:109010589-109613918
CIL_00098B CIL_00098B_0002 VISTA 8:109116597-109718209
CIL_00098E CIL_00098E_0002 VISTA 8:109136455-109737561

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005737 IDA cytoplasm
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000087389 PMFBP1 polyamine modulated factor 1 binding protein 1 protein_coding Danio_rerio
ENSG00000118557 PMFBP1 polyamine modulated factor 1 binding protein 1 protein_coding Homo_sapiens

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