C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000CK_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000091003-ENSDARG00000089880 CGP 7955 18:18186339-18365719
GeneTranscriptPositionBiotype
ENSDARG00000004896 (lonp2)
lon peptidase 2, peroxisomal 		ENSDART00000027791 (lonp2-201) 18134845-18183695 protein_coding
ENSDART00000028806 (lonp2-202) 18134845-18306965 protein_coding
ENSDARG00000069128 (il34)
interleukin 34 		ENSDART00000100372 (il34-201) 18309492-18325712 protein_coding
ENSDARG00000089880 (sf3b3)
splicing factor 3b, subunit 3 		ENSDART00000008310 (sf3b3-201) 18209587-18365672 protein_coding
ENSDART00000122831 (sf3b3-202) 18333489-18364408 protein_coding
ENSDART00000145582 (sf3b3-002) 18333597-18337960 retained_intron
ENSDART00000147743 (sf3b3-001) 18332810-18365719 protein_coding
ENSDARG00000091003 (il34)
interleukin 34 		ENSDART00000126460 (il34-202) 18186339-18202526 protein_coding
CIL_0000CK_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031750-ENSMUSG00000033732 CGP 10090 8:110741829-110846803
GeneTranscriptPositionBiotype
ENSMUSG00000031750 (Il34)
interleukin 34 		ENSMUST00000076846 (Il34-001) 110741840-110805903 protein_coding
ENSMUST00000137362 (Il34-003) 110755525-110805924 processed_transcript
ENSMUST00000148732 (Il34-005) 110755236-110790888 processed_transcript
ENSMUST00000150680 (Il34-002) 110741840-110805872 protein_coding
ENSMUST00000154803 (Il34-004) 110741829-110742698 processed_transcript
ENSMUSG00000031753 (Cog4)
component of oligomeric golgi complex 4 		ENSMUST00000034203 (Cog4-001) 110847034-110882227 protein_coding
ENSMUST00000165867 (Cog4-005) 110846600-110881895 protein_coding
ENSMUST00000172497 (Cog4-012) 110880988-110881756 retained_intron
ENSMUST00000172542 (Cog4-002) 110859859-110881865 nonsense_mediated_decay
ENSMUST00000172668 (Cog4-010) 110847034-110852345 protein_coding
ENSMUST00000172897 (Cog4-007) 110847051-110853829 nonsense_mediated_decay
ENSMUST00000173501 (Cog4-004) 110859704-110868421 retained_intron
ENSMUST00000173794 (Cog4-013) 110863100-110866654 retained_intron
ENSMUST00000174165 (Cog4-008) 110847024-110853728 nonsense_mediated_decay
ENSMUST00000174398 (Cog4-003) 110847054-110881865 protein_coding
ENSMUST00000174679 (Cog4-009) 110849871-110882221 protein_coding
ENSMUST00000174702 (Cog4-006) 110847039-110850273 retained_intron
ENSMUST00000174723 (Cog4-011) 110847051-110853783 nonsense_mediated_decay
ENSMUST00000174800 (Cog4-014) 110847051-110853792 processed_transcript
ENSMUSG00000033732 (Sf3b3)
splicing factor 3b, subunit 3 		ENSMUST00000042012 (Sf3b3-201) 110810492-110846803 protein_coding
ENSMUSG00000080396 (Snord111)
small nucleolar RNA, C/D box 111 		ENSMUST00000116746 (Snord111-201) 110838528-110838616 snoRNA
ENSMUSG00000090039 (Gm15894)
predicted gene 15894 		ENSMUST00000162828 (Gm15894-001) 110754992-110758970 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000CK_0001ENSDARG00000004896ENSDART00000027791ENSDART00000028806ENSDARG00000069128ENSDART00000100372ENSDARG00000089880ENSDART00000008310ENSDART00000122831ENSDART00000145582ENSDART00000147743ENSDARG00000091003ENSDART00000126460CIL_0000CK_0002ENSMUSG00000031750ENSMUST00000076846ENSMUST00000137362ENSMUST00000148732ENSMUST00000150680ENSMUST00000154803ENSMUSG00000031753ENSMUST00000034203ENSMUST00000165867ENSMUST00000172497ENSMUST00000172542ENSMUST00000172668ENSMUST00000172897ENSMUST00000173501ENSMUST00000173794ENSMUST00000174165ENSMUST00000174398ENSMUST00000174679ENSMUST00000174702ENSMUST00000174723ENSMUST00000174800ENSMUSG00000033732ENSMUST00000042012ENSMUSG00000080396ENSMUST00000116746ENSMUSG00000090039ENSMUST00000162828
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000CK_0001ENSDARG00000004896ENSDART00000027791ENSDART00000028806ENSDARG00000069128ENSDART00000100372ENSDARG00000089880ENSDART00000008310ENSDART00000147743ENSDARG00000091003ENSDART00000126460CIL_0000CK_0002ENSMUSG00000031750ENSMUST00000076846ENSMUST00000137362ENSMUST00000148732ENSMUST00000150680ENSMUST00000154803ENSMUSG00000031753ENSMUST00000034203ENSMUST00000165867ENSMUSG00000033732ENSMUST00000042012ENSMUSG00000080396ENSMUST00000116746ENSMUSG00000090039ENSMUST00000162828
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000004896 ENSDART00000027791 N/A N/A N/A 1.341±0.05 N/A N/A 25.655±25.51 41.863±9.34 0.476±0.00 N/A 1.644±0.00 N/A N/A N/A
ENSDART00000028806 N/A N/A N/A 1.457±0.87 N/A N/A 3.908±0.80 1.917±0.00 0.607±0.00 N/A 1.721±0.00 N/A N/A N/A
ENSDARG00000069128 ENSDART00000100372 N/A N/A N/A 0.206±0.06 N/A N/A 1.182±0.66 0.501±0.32 0.069±0.00 N/A 0.341±0.00 N/A N/A N/A
ENSDARG00000089880 ENSDART00000008310 N/A N/A N/A 0.947±0.59 N/A N/A 1.374±0.77 4.685±2.96 0.964±0.00 N/A 0.848±0.00 N/A N/A N/A
ENSDART00000122831 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000145582 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000147743 N/A N/A N/A 0.699±0.12 N/A N/A 0.597±0.04 1.278±0.00 0.262±0.00 N/A 0.435±0.00 N/A N/A N/A
ENSDARG00000091003 ENSDART00000126460 N/A N/A N/A 0.141±0.09 N/A N/A 0.270±0.11 0.246±0.06 0.104±0.00 N/A 0.147±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031750 ENSMUST00000076846 12.959±8.24 23.811±2.52 4.729±0.63 0.580±0.28 9.060±3.15 7.229±0.74 1.902±0.64 6.136±0.46 0.887±0.75 9.156±1.18 1.742±0.60 4.051±0.94 3.788±5.20 0.263±0.17
ENSMUST00000137362 N/A 69.351±3.57 N/A N/A 38.806±4.56 27.743±5.16 10.552±4.08 22.698±4.08 2.528±1.32 52.808±2.44 N/A 19.661±7.19 N/A N/A
ENSMUST00000148732 N/A 21.394±2.65 N/A N/A N/A N/A N/A N/A 0.911±0.61 N/A N/A 6.089±0.63 N/A N/A
ENSMUST00000150680 N/A 5.246±0.60 N/A N/A 2.456±0.43 1.877±0.48 0.208±0.00 N/A N/A N/A 0.955±0.00 0.950±0.19 1.816±0.00 N/A
ENSMUST00000154803 N/A N/A N/A N/A N/A N/A N/A N/A 0.074±0.04 N/A 1.599±0.30 2.972±0.09 0.092±0.04 N/A
ENSMUSG00000031753 ENSMUST00000034203 27.209±5.42 13.509±4.45 16.190±1.13 14.359±2.42 18.314±4.86 12.161±3.87 14.576±2.01 16.659±3.18 11.333±1.62 12.101±0.53 19.359±0.61 18.298±6.48 20.824±3.16 24.495±3.15
ENSMUST00000165867 N/A N/A N/A 10.499±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 7.804±0.00 N/A
ENSMUST00000172497 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172542 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172668 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172897 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173501 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173794 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174165 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174398 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174679 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174702 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174723 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174800 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000033732 ENSMUST00000042012 26.117±11.63 16.634±5.29 15.783±0.17 24.497±9.43 20.573±5.80 14.447±4.39 10.464±0.54 13.354±0.32 18.221±11.99 18.916±1.16 4.709±0.33 35.212±5.91 28.609±12.97 10.226±0.86
ENSMUSG00000080396 ENSMUST00000116746 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 50.319±0.00 193.594±122.09 N/A
ENSMUSG00000090039 ENSMUST00000162828 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.236±0.09

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