C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: microtubule-associated protein 1 light chain 3 beta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000034270 Map1lc3b-001 ENSMUSG00000031812 10090 + 8:121590361-121598760 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008VY CIL_0008VY_0002 VISTA 8:121000361-121603557
CIL_0008WG CIL_0008WG_0002 VISTA 8:121365198-121966118

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005776 IDA autophagic vacuole
GO:0005874 IEA microtubule
GO:0005930 IDA axoneme
GO:0006914 IEA autophagy
GO:0016020 IDA membrane
GO:0031410 IEA cytoplasmic vesicle
GO:0070257 IMP positive regulation of mucus secretion

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000360668 MAP1LC3A-002 protein_coding Homo_sapiens 0 254
ENST00000374837 MAP1LC3A-001 protein_coding Homo_sapiens 0 254
ENST00000397709 MAP1LC3A-003 protein_coding Homo_sapiens 0 254
ENST00000476428 MAP1LC3A-004 processed_transcript Homo_sapiens 0 226

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