C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ring finger 111
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000032217 Rnf111 10090 - 9:70425429-70503725 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000034739 Rnf111-201 70425429-70503725 protein_coding
  ENSMUST00000113595 Rnf111-202 70425430-70503354 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034739ENSMUST00000113595
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034739 9.152±3.81 13.469±7.32 4.994±2.18 13.690±0.94 13.529±7.39 10.317±6.18 3.083±0.87 6.753±2.09 4.342±1.61 14.139±0.29 0.591±0.23 18.292±12.96 6.994±4.14 5.666±0.58
ENSMUST00000113595 3.134±0.00 N/A N/A 3.858±0.16 8.981±0.05 N/A 2.337±0.12 N/A 3.386±1.92 2.170±0.00 N/A 4.364±0.73 3.165±0.39 2.169±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00024E CIL_00024E_0002 CGP 9:70425429-70592237

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000209 IDA protein polyubiquitination
GO:0004842 IMP ubiquitin-protein transferase activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005730 IEA nucleolus
GO:0005737 IDA cytoplasm
GO:0007389 IMP pattern specification process
GO:0008270 IEA zinc ion binding
GO:0016874 IEA ligase activity
GO:0030511 IDA positive regulation of transforming growth factor beta receptor signaling pathway
GO:0030579 IDA ubiquitin-dependent SMAD protein catabolic process
GO:0031398 IDA positive regulation of protein ubiquitination
GO:0032184 ISS SUMO polymer binding
GO:0043234 IDA protein complex
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0046332 IEA SMAD binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000078802 RNF111 ring finger protein 111 protein_coding Danio_rerio
ENSG00000157450 RNF111 ring finger protein 111 protein_coding Homo_sapiens

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