C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00024E_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000157450-ENSG00000157450 CGP 9606 15:58865175-59097419
GeneTranscriptPositionBiotype
ENSG00000137776 (SLTM)
SAFB-like, transcription modulator 		ENST00000249736 (SLTM-014) 58894158-58933579 protein_coding
ENST00000380516 (SLTM-001) 58879045-58933653 protein_coding
ENST00000432750 (SLTM-009) 58879419-58897120 protein_coding
ENST00000473359 (SLTM-010) 58894189-58897564 retained_intron
ENST00000474342 (SLTM-006) 58932152-58933616 retained_intron
ENST00000480144 (SLTM-007) 58897982-58933600 retained_intron
ENST00000484498 (SLTM-004) 58916574-58933574 retained_intron
ENST00000492526 (SLTM-002) 58879429-58933579 nonsense_mediated_decay
ENST00000493062 (SLTM-008) 58879432-58887124 retained_intron
ENST00000497088 (SLTM-005) 58893926-58899083 retained_intron
ENST00000557791 (SLTM-021) 58887457-58889490 protein_coding
ENST00000557924 (SLTM-011) 58879560-58933599 nonsense_mediated_decay
ENST00000557950 (SLTM-018) 58900417-58933558 processed_transcript
ENST00000558052 (SLTM-023) 58883479-58888422 retained_intron
ENST00000558486 (SLTM-017) 58899705-58933574 protein_coding
ENST00000558734 (SLTM-024) 58889144-58893292 retained_intron
ENST00000558756 (SLTM-019) 58894090-58933449 nonsense_mediated_decay
ENST00000559261 (SLTM-013) 58913499-58933600 nonsense_mediated_decay
ENST00000559305 (SLTM-016) 58894459-58933576 nonsense_mediated_decay
ENST00000559880 (SLTM-012) 58899611-58933594 protein_coding
ENST00000560012 (SLTM-003) 58913557-58933581 processed_transcript
ENST00000560494 (SLTM-025) 58879425-58887007 protein_coding
ENST00000560532 (SLTM-020) 58900968-58912801 retained_intron
ENST00000560682 (SLTM-015) 58899791-58933576 protein_coding
ENST00000560695 (SLTM-022) 58887292-58888729 retained_intron
ENSG00000157450 (RNF111)
ring finger protein 111 		ENST00000348370 (RNF111-001) 58987655-59097419 protein_coding
ENST00000557998 (RNF111-003) 58988138-59096431 protein_coding
ENST00000558977 (RNF111-008) 59080944-59084364 retained_intron
ENST00000559077 (RNF111-009) 59083940-59089696 retained_intron
ENST00000559160 (RNF111-006) 58987677-59031138 protein_coding
ENST00000559209 (RNF111-002) 58987952-59097054 protein_coding
ENST00000559592 (RNF111-011) 59031624-59058684 protein_coding
ENST00000559757 (RNF111-007) 58865175-59031216 protein_coding
ENST00000560080 (RNF111-012) 59093402-59095511 processed_transcript
ENST00000560216 (RNF111-010) 59085506-59092614 retained_intron
ENST00000560952 (RNF111-005) 59085587-59096426 retained_intron
ENST00000561186 (RNF111-004) 59030823-59096424 protein_coding
ENSG00000241640 (RP11-59H7.1)
 ENST00000467293 (RP11-59H7.1-001) 59049399-59050385 processed_pseudogene
ENSG00000242747 (RP11-30K9.1)
 ENST00000465295 (RP11-30K9.1-001) 58869659-58870134 processed_pseudogene
ENSG00000259393 (RP11-313H3.1)
 ENST00000558683 (RP11-313H3.1-001) 58967046-58967808 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_00024E_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000032217-ENSMUSG00000032212 CGP 10090 9:70425429-70592237
GeneTranscriptPositionBiotype
ENSMUSG00000032212 (Sltm)
SAFB-like, transcription modulator 		ENSMUST00000049263 (Sltm-201) 70542920-70592237 protein_coding
ENSMUSG00000032217 (Rnf111)
ring finger 111 		ENSMUST00000034739 (Rnf111-201) 70425429-70503725 protein_coding
ENSMUST00000113595 (Rnf111-202) 70425430-70503354 protein_coding
ENSMUSG00000065202 (Gm24615)
predicted gene, 24615 		ENSMUST00000083268 (Gm24615-201) 70475484-70475596 snoRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00024E_0001ENSG00000137776ENST00000249736ENST00000380516ENST00000432750ENST00000493062ENST00000557924ENST00000558052ENST00000559880ENSG00000157450ENST00000348370ENST00000557998ENST00000559209ENST00000560952ENST00000561186ENSG00000241640ENST00000467293ENSG00000242747ENST00000465295ENSG00000259393ENST00000558683CIL_00024E_0002ENSMUSG00000032212ENSMUST00000049263ENSMUSG00000032217ENSMUST00000034739ENSMUST00000113595ENSMUSG00000065202ENSMUST00000083268
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000137776 ENST00000249736 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.782±0.00 N/A N/A N/A
ENST00000380516 6.464±0.00 9.659±0.00 2.230±0.00 4.699±2.28 5.262±0.50 5.256±0.13 4.281±3.15 6.232±1.31 3.869±0.37 2.632±0.00 4.570±0.00 9.920±8.13 7.762±6.97 17.789±7.14
ENST00000432750 N/A 7.639±0.00 N/A 3.794±0.00 4.259±0.00 3.524±0.00 6.950±0.00 8.699±0.00 N/A 5.029±0.00 5.145±0.00 14.086±9.72 7.687±6.33 18.920±12.21
ENST00000473359 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474342 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480144 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484498 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492526 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493062 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.751±0.00 N/A
ENST00000497088 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557791 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557924 2.716±0.00 N/A N/A 4.694±0.00 N/A N/A 2.723±0.00 N/A N/A N/A 5.253±0.00 8.250±0.00 12.606±0.00 9.895±0.00
ENST00000557950 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558052 N/A N/A 16.566±0.00 N/A 19.320±0.00 22.273±0.00 N/A 12.445±0.00 10.833±0.00 N/A N/A 18.587±0.00 N/A N/A
ENST00000558486 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558734 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558756 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559261 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559305 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559880 N/A N/A 9.077±0.00 10.674±0.00 N/A N/A 5.126±0.00 N/A 8.735±0.00 14.380±0.00 2.269±0.00 N/A N/A 33.873±0.00
ENST00000560012 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560494 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560532 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560682 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560695 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000157450 ENST00000348370 N/A 1.090±0.00 N/A 2.582±0.83 N/A N/A N/A N/A N/A N/A N/A 1.470±0.00 0.631±0.00 1.607±0.00
ENST00000557998 1.182±0.00 1.211±0.00 N/A 1.974±0.00 2.881±0.00 N/A N/A 2.406±0.93 N/A 2.220±0.00 N/A 2.151±0.00 N/A N/A
ENST00000558977 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559077 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559160 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559209 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.966±0.06 1.941±0.00 3.129±0.00
ENST00000559592 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559757 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560080 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560216 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560952 N/A N/A N/A N/A N/A 5.205±0.00 N/A 2.818±0.00 1.117±0.00 N/A 0.582±0.00 4.316±0.44 N/A N/A
ENST00000561186 1.546±0.00 1.361±0.00 1.801±0.00 N/A 2.172±0.00 2.231±0.00 2.284±0.93 1.246±0.00 1.270±0.00 2.891±0.36 1.712±1.25 N/A 1.877±0.25 2.646±0.00
ENSG00000241640 ENST00000467293 N/A 0.103±0.00 N/A 0.074±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000242747 ENST00000465295 0.100±0.00 0.077±0.00 N/A 0.076±0.00 0.149±0.00 0.094±0.00 0.048±0.00 0.025±0.00 N/A 0.047±0.00 0.115±0.00 0.063±0.02 0.108±0.00 0.139±0.07
ENSG00000259393 ENST00000558683 N/A 0.071±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.038±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032212 ENSMUST00000049263 2.243±1.05 1.496±0.20 5.493±0.87 25.710±21.44 2.062±0.75 2.723±1.36 1.175±0.32 2.418±1.05 6.831±5.92 2.471±1.25 3.848±1.26 10.509±12.16 13.816±6.49 138.039±185.10
ENSMUSG00000032217 ENSMUST00000034739 9.152±3.81 13.469±7.32 4.994±2.18 13.690±0.94 13.529±7.39 10.317±6.18 3.083±0.87 6.753±2.09 4.342±1.61 14.139±0.29 0.591±0.23 18.292±12.96 6.994±4.14 5.666±0.58
ENSMUST00000113595 3.134±0.00 N/A N/A 3.858±0.16 8.981±0.05 N/A 2.337±0.12 N/A 3.386±1.92 2.170±0.00 N/A 4.364±0.73 3.165±0.39 2.169±0.00
ENSMUSG00000065202 ENSMUST00000083268 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 98.703±0.00 N/A

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