C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: reticulocalbin 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000032320 Rcn2 10090 + 9:56041845-56061882 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000114276 Rcn2-001 56041857-56059077 protein_coding
  ENSMUST00000144869 Rcn2-004 56041885-56053135 retained_intron
  ENSMUST00000147842 Rcn2-002 56041845-56061882 nonsense_mediated_decay
  ENSMUST00000151585 Rcn2-003 56041870-56044226 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000114276ENSMUST00000144869
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000114276 16.585±4.21 16.612±4.48 49.737±3.94 56.082±13.89 9.959±0.66 7.119±2.02 12.098±1.23 13.478±1.73 6.640±4.22 21.232±1.71 8.691±0.48 19.201±7.41 29.162±3.24 12.344±3.14
ENSMUST00000144869 14.369±7.87 107.354±16.32 N/A N/A 28.608±12.46 24.813±5.13 N/A 16.356±6.14 2.408±0.66 29.248±13.37 N/A 94.708±44.05 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000246 CIL_000246_0002 CGP 9:56041845-56128888

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0005730 IEA nucleolus
GO:0005783 IEA endoplasmic reticulum

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000039378 rcn2 reticulocalbin 2 protein_coding Danio_rerio
ENSG00000117906 RCN2 reticulocalbin 2, EF-hand calcium binding domain protein_coding Homo_sapiens

Loading