C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: reticulocalbin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000114276 Rcn2-001 ENSMUSG00000032320 10090 + 9:56041857-56059077 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000114276
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000114276 16.585±4.21 16.612±4.48 49.737±3.94 56.082±13.89 9.959±0.66 7.119±2.02 12.098±1.23 13.478±1.73 6.640±4.22 21.232±1.71 8.691±0.48 19.201±7.41 29.162±3.24 12.344±3.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000246 CIL_000246_0002 CGP 9:56041845-56128888

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0005730 IEA nucleolus
GO:0005783 IEA endoplasmic reticulum

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000320963 RCN2-002 protein_coding Homo_sapiens 0 1242
ENST00000394883 RCN2-003 protein_coding Homo_sapiens 0 1230
ENST00000394885 RCN2-001 protein_coding Homo_sapiens 0 1810
ENST00000557805 RCN2-006 nonsense_mediated_decay Homo_sapiens 0 466
ENST00000558598 RCN2-004 retained_intron Homo_sapiens 0 289
ENST00000560833 RCN2-005 retained_intron Homo_sapiens 0 484

Loading