C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ubiquitin-conjugating enzyme E2C binding protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000032415 Ube2cbp 10090 - 9:86307306-86464950 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000034986 Ube2cbp-001 86307306-86464950 protein_coding
  ENSMUST00000121189 Ube2cbp-003 86307742-86464950 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034986ENSMUST00000121189
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034986 1.107±0.75 0.475±0.22 1.225±0.22 1.960±0.09 0.641±0.23 0.651±0.25 0.465±0.08 0.996±0.18 1.305±0.43 0.457±0.02 1.002±0.23 0.911±0.56 0.653±0.44 0.582±0.30
ENSMUST00000121189 N/A 0.433±0.34 N/A N/A 0.801±0.18 0.858±0.36 N/A N/A 0.315±0.14 0.218±0.06 0.193±0.00 1.253±0.38 N/A 0.140±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006GG CIL_0006GG_0002 CGP 9:85842380-86464950
CIL_000673 CIL_000673_0002 CGP 9:86307306-86555923

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005737 IEA cytoplasm
GO:0008150 ND biological_process
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000026178 ube3d ubiquitin protein ligase E3D protein_coding Danio_rerio
ENSG00000118420 UBE3D ubiquitin protein ligase E3D protein_coding Homo_sapiens

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