C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAB6B, member RAS oncogene family
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000035155 Rab6b-001 ENSMUSG00000032549 10090 + 9:103111807-103185276 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000035155
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000035155 1.884±1.02 0.994±0.10 2.481±0.34 50.216±31.89 0.355±0.12 1.097±0.66 1.466±0.86 1.167±0.32 0.091±0.06 4.263±2.43 1.644±0.33 1.474±1.03 10.291±7.29 0.563±0.27

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005UG CIL_0005UG_0002 CGP 9:102988712-103185276

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005575 ND cellular_component
GO:0005794 IEA Golgi apparatus
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0016192 IEA vesicle-mediated transport
GO:0031410 IEA cytoplasmic vesicle
GO:0031489 IEA myosin V binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000285208 RAB6B-001 protein_coding Homo_sapiens 0 1613
ENST00000460865 RAB6B-006 protein_coding Homo_sapiens 0 409
ENST00000469959 RAB6B-002 protein_coding Homo_sapiens 0 357
ENST00000477759 RAB6B-003 protein_coding Homo_sapiens 0 566
ENST00000486858 RAB6B-004 protein_coding Homo_sapiens 0 843
ENST00000488969 RAB6B-005 protein_coding Homo_sapiens 0 276
ENST00000543906 RAB6B-201 protein_coding Homo_sapiens 0 1476

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