C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0005UG_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000061896-ENSDARG00000034522 CGP 7955 6:27332251-27584734
GeneTranscriptPositionBiotype
ENSDARG00000034522 (rab6ba)
RAB6B, member RAS oncogene family a
ENSDART00000049177 (rab6ba-001) 27375587-27584734 protein_coding
ENSDARG00000061896 (slco2a1)
solute carrier organic anion transporter family, member 2A1
ENSDART00000046510 (slco2a1-201) 27332268-27373486 protein_coding
ENSDART00000147789 (slco2a1-001) 27332251-27372610 protein_coding
CIL_0005UG_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000032548-ENSMUSG00000032549 CGP 10090 9:102988712-103185276
GeneTranscriptPositionBiotype
ENSMUSG00000032548 (Slco2a1)
solute carrier organic anion transporter family, member 2a1
ENSMUST00000035148 (Slco2a1-001) 103008002-103090451 protein_coding
ENSMUST00000185215 (Slco2a1-003) 102988712-103020775 processed_transcript
ENSMUST00000188664 (Slco2a1-002) 103008499-103096002 nonsense_mediated_decay
ENSMUST00000190892 (Slco2a1-004) 103008154-103011907 retained_intron
ENSMUSG00000032549 (Rab6b)
RAB6B, member RAS oncogene family
ENSMUST00000035155 (Rab6b-001) 103111807-103185276 protein_coding
ENSMUST00000189134 (Rab6b-002) 103111787-103162657 processed_transcript
ENSMUSG00000084539 (Gm25842)
predicted gene, 25842
ENSMUST00000122590 (Gm25842-201) 102991895-102992216 misc_RNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005UG_0001ENSDARG00000034522ENSDART00000049177ENSDARG00000061896ENSDART00000046510ENSDART00000147789CIL_0005UG_0002ENSMUSG00000032548ENSMUST00000035148ENSMUST00000185215ENSMUST00000188664ENSMUST00000190892ENSMUSG00000032549ENSMUST00000035155ENSMUST00000189134ENSMUSG00000084539ENSMUST00000122590
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005UG_0001ENSDARG00000034522ENSDART00000049177ENSDARG00000061896ENSDART00000046510ENSDART00000147789CIL_0005UG_0002ENSMUSG00000032548ENSMUST00000035148ENSMUST00000188664ENSMUST00000190892ENSMUSG00000032549ENSMUST00000035155ENSMUST00000189134ENSMUSG00000084539ENSMUST00000122590
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000034522 ENSDART00000049177 N/A N/A N/A 108.580±18.62 N/A N/A 1.334±0.32 1.112±0.23 0.094±0.00 N/A 2.826±0.00 N/A N/A N/A
ENSDARG00000061896 ENSDART00000046510 N/A N/A N/A 5.341±1.00 N/A N/A 3.680±1.74 21.635±0.00 5.113±0.00 N/A N/A N/A N/A N/A
ENSDART00000147789 N/A N/A N/A 1.362±0.00 N/A N/A 0.934±0.00 4.520±0.00 19.599±0.00 N/A 0.875±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032548 ENSMUST00000035148 2.021±0.70 1.363±0.11 2.150±0.89 0.216±0.11 11.174±0.80 10.265±2.93 1.033±0.26 4.576±0.98 4.626±3.25 65.635±5.14 0.266±0.12 13.015±3.54 22.025±21.53 1.521±1.15
ENSMUST00000185215 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188664 1.844±0.79 1.696±0.19 N/A N/A 10.500±2.35 12.175±3.11 0.609±0.12 3.469±0.92 6.291±2.40 59.747±17.50 N/A 15.702±2.62 26.785±27.97 0.454±0.40
ENSMUST00000190892 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.038±0.00
ENSMUSG00000032549 ENSMUST00000035155 1.884±1.02 0.994±0.10 2.481±0.34 50.216±31.89 0.355±0.12 1.097±0.66 1.466±0.86 1.167±0.32 0.091±0.06 4.263±2.43 1.644±0.33 1.474±1.03 10.291±7.29 0.563±0.27
ENSMUST00000189134 0.890±0.00 5.858±1.09 N/A N/A 1.054±0.40 0.348±0.06 N/A N/A 0.099±0.03 3.030±0.90 N/A 2.918±0.96 37.907±0.00 0.743±0.17
ENSMUSG00000084539 ENSMUST00000122590 0.252±0.03 N/A 0.100±0.00 N/A 0.559±0.30 N/A N/A N/A 0.209±0.05 0.237±0.00 N/A 0.255±0.00 0.320±0.20 0.211±0.00

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