C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nucleoporin 93
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000032939 Nup93 10090 + 8:94214597-94315066 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000079961 Nup93-201 94214597-94314857 protein_coding
  ENSMUST00000109547 Nup93-202 94227661-94315066 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000079961ENSMUST00000109547
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000079961 9.222±2.85 4.050±0.56 11.752±0.38 14.518±5.19 5.966±1.67 7.102±0.75 5.122±0.42 4.177±0.77 11.940±11.29 7.629±1.13 3.848±0.32 10.486±2.61 23.100±12.21 6.470±0.84
ENSMUST00000109547 N/A 1.009±0.21 N/A 1.522±0.00 N/A N/A N/A N/A N/A N/A N/A 2.849±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000450 CIL_000450_0003 CGP 8:94214597-94366213

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005643 ISS nuclear pore
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0017056 ISS structural constituent of nuclear pore
GO:0031965 ISS nuclear membrane
GO:0034399 ISS nuclear periphery
GO:0051028 IEA mRNA transport
GO:0051292 ISS nuclear pore complex assembly

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000003487 nup93 nucleoporin 93 protein_coding Danio_rerio
ENSG00000102900 NUP93 nucleoporin 93kDa protein_coding Homo_sapiens

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