C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000450_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000003487-ENSDARG00000013855 CGP 7955 18:17196479-17257923
GeneTranscriptPositionBiotype
ENSDARG00000003487 (nup93)
nucleoporin 93 		ENSDART00000025782 (nup93-001) 17196512-17237138 protein_coding
ENSDART00000100261 (nup93-201) 17196512-17201963 protein_coding
ENSDART00000144960 (nup93-003) 17196479-17225680 processed_transcript
ENSDART00000147839 (nup93-002) 17197333-17202122 protein_coding
ENSDARG00000013855 (slc12a3)
solute carrier family 12 (sodium/chloride transporters), member 3 		ENSDART00000010998 (slc12a3-001) 17242647-17257923 protein_coding
ENSDART00000145340 (slc12a3-002) 17242651-17244919 retained_intron
ENSDART00000154815 (slc12a3-201) 17242630-17257174 protein_coding
CIL_000450_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000102900-ENSG00000070915 CGP 9606 16:56730105-56915850
GeneTranscriptPositionBiotype
ENSG00000070915 (SLC12A3)
solute carrier family 12 (sodium/chloride transporter), member 3 		ENST00000262502 (SLC12A3-003) 56865211-56914525 protein_coding
ENST00000438926 (SLC12A3-001) 56865207-56915850 protein_coding
ENST00000563236 (SLC12A3-005) 56865211-56914522 protein_coding
ENST00000563352 (SLC12A3-007) 56907026-56913978 processed_transcript
ENST00000566786 (SLC12A3-002) 56865207-56913405 protein_coding
ENST00000569002 (SLC12A3-006) 56902222-56904852 retained_intron
ENSG00000102900 (NUP93)
nucleoporin 93kDa 		ENST00000308159 (NUP93-001) 56730105-56844769 protein_coding
ENST00000542526 (NUP93-004) 56783456-56850286 protein_coding
ENST00000562496 (NUP93-021) 56740714-56805552 protein_coding
ENST00000563405 (NUP93-008) 56836625-56839216 protein_coding
ENST00000563437 (NUP93-012) 56831515-56833389 retained_intron
ENST00000563465 (NUP93-010) 56841641-56844763 retained_intron
ENST00000563486 (NUP93-007) 56837625-56839935 protein_coding
ENST00000563858 (NUP93-023) 56730118-56832353 protein_coding
ENST00000564278 (NUP93-009) 56839400-56844752 retained_intron
ENST00000564887 (NUP93-003) 56781658-56844764 protein_coding
ENST00000566315 (NUP93-020) 56730129-56805597 protein_coding
ENST00000566678 (NUP93-013) 56748349-56805686 protein_coding
ENST00000566727 (NUP93-015) 56781829-56821542 processed_transcript
ENST00000567081 (NUP93-016) 56783380-56805562 protein_coding
ENST00000567641 (NUP93-018) 56782246-56829021 protein_coding
ENST00000568283 (NUP93-017) 56782250-56805632 protein_coding
ENST00000568656 (NUP93-019) 56747911-56818709 protein_coding
ENST00000569322 (NUP93-011) 56839010-56844764 protein_coding
ENST00000569595 (NUP93-014) 56781829-56805615 processed_transcript
ENST00000569842 (NUP93-002) 56730130-56844769 protein_coding
ENST00000569863 (NUP93-022) 56730149-56823798 protein_coding
ENSG00000205362 (MT1A)
metallothionein 1A 		ENST00000290705 (MT1A-001) 56638666-56640087 protein_coding
ENST00000622334 (MT1A-201) 56638666-56750276 protein_coding
ENSG00000243988 (RPS24P17)
ribosomal protein S24 pseudogene 17 		ENST00000479895 (RPS24P17-001) 56906534-56906956 processed_pseudogene
CIL_000450_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000032939-ENSMUSG00000031766 CGP 10090 8:94214597-94366213
GeneTranscriptPositionBiotype
ENSMUSG00000031766 (Slc12a3)
solute carrier family 12, member 3 		ENSMUST00000034218 (Slc12a3-201) 94329192-94366213 protein_coding
ENSMUSG00000032939 (Nup93)
nucleoporin 93 		ENSMUST00000079961 (Nup93-201) 94214597-94314857 protein_coding
ENSMUST00000109547 (Nup93-202) 94227661-94315066 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000450_0001ENSDARG00000003487ENSDART00000025782ENSDART00000100261ENSDART00000144960ENSDART00000147839ENSDARG00000013855ENSDART00000010998ENSDART00000145340ENSDART00000154815CIL_000450_0002ENSG00000070915ENST00000262502ENST00000438926ENST00000563236ENST00000563352ENST00000566786ENST00000569002ENSG00000102900ENST00000308159ENST00000542526ENST00000562496ENST00000563405ENST00000563437ENST00000563465ENST00000563486ENST00000563858ENST00000564278ENST00000564887ENST00000566315ENST00000566678ENST00000566727ENST00000567081ENST00000567641ENST00000568283ENST00000568656ENST00000569322ENST00000569595ENST00000569842ENST00000569863ENSG00000205362ENST00000290705ENST00000622334ENSG00000243988ENST00000479895CIL_000450_0003ENSMUSG00000031766ENSMUST00000034218ENSMUSG00000032939ENSMUST00000079961ENSMUST00000109547
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000450_0001ENSDARG00000003487ENSDART00000025782ENSDART00000100261ENSDARG00000013855ENSDART00000010998ENSDART00000145340ENSDART00000154815CIL_000450_0002ENSG00000070915ENST00000262502ENST00000438926ENST00000563236ENST00000563352ENST00000566786ENSG00000102900ENST00000308159ENST00000542526ENST00000563405ENST00000563437ENST00000563465ENST00000564887ENST00000567641ENST00000568656ENST00000569842ENSG00000205362ENST00000290705ENST00000622334ENSG00000243988ENST00000479895CIL_000450_0003ENSMUSG00000031766ENSMUST00000034218ENSMUSG00000032939ENSMUST00000079961ENSMUST00000109547
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000003487 ENSDART00000025782 N/A N/A N/A 11.245±7.28 N/A N/A 1.633±1.04 12.264±0.00 2.501±0.00 N/A 4.942±0.00 N/A N/A N/A
ENSDART00000100261 N/A N/A N/A N/A N/A N/A 5.966±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000144960 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000147839 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000013855 ENSDART00000010998 N/A N/A N/A 0.142±0.03 N/A N/A N/A 69.577±10.62 N/A N/A 8.229±0.00 N/A N/A N/A
ENSDART00000145340 N/A N/A N/A 0.651±0.00 N/A N/A 0.627±0.00 N/A 0.091±0.00 N/A N/A N/A N/A N/A
ENSDART00000154815 N/A N/A N/A 0.031±0.00 N/A N/A N/A N/A 0.125±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000070915 ENST00000262502 0.011±0.00 0.192±0.00 11.520±0.00 0.011±0.00 0.028±0.00 0.014±0.00 0.011±0.00 14.478±0.00 0.006±0.00 0.010±0.00 N/A 0.006±0.00 0.784±1.04 0.029±0.00
ENST00000438926 N/A N/A 3.166±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.009±0.01 1.016±0.00 N/A
ENST00000563236 0.011±0.00 0.210±0.00 4.689±0.00 0.011±0.00 0.028±0.00 0.014±0.00 0.011±0.00 35.448±0.00 0.006±0.00 0.010±0.00 N/A 0.006±0.00 0.581±0.75 0.029±0.00
ENST00000563352 N/A N/A N/A N/A N/A N/A N/A N/A 0.018±0.00 N/A N/A N/A N/A 0.113±0.00
ENST00000566786 N/A N/A N/A N/A N/A 0.018±0.00 N/A N/A N/A 0.014±0.01 N/A N/A N/A N/A
ENST00000569002 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000102900 ENST00000308159 11.236±0.00 9.731±0.00 N/A 5.353±0.00 6.620±0.00 6.787±0.00 3.468±2.50 10.776±0.00 2.391±1.01 8.624±0.00 3.983±3.02 14.994±4.12 13.200±1.52 38.196±6.17
ENST00000542526 N/A N/A 0.113±0.00 0.827±0.00 N/A N/A N/A 0.116±0.00 N/A N/A 0.089±0.00 N/A N/A N/A
ENST00000562496 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563405 N/A N/A N/A N/A N/A N/A 2.730±0.00 2.151±0.00 N/A N/A N/A N/A N/A N/A
ENST00000563437 N/A N/A 1.551±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563465 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.702±0.00 N/A N/A
ENST00000563486 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563858 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564278 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564887 N/A N/A 0.393±0.00 1.523±0.00 N/A N/A N/A N/A N/A N/A N/A 0.959±0.00 N/A N/A
ENST00000566315 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566678 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566727 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567081 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567641 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.168±0.00 N/A N/A N/A
ENST00000568283 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568656 N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.348±0.00 5.155±2.06 N/A N/A N/A
ENST00000569322 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569595 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569842 N/A N/A N/A N/A 1.372±0.40 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569863 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000205362 ENST00000290705 6.427±0.00 12.106±0.00 N/A 2.531±1.99 0.684±0.00 6.419±0.00 18.777±0.00 26.893±16.63 403.034±0.00 74.607±72.91 3.552±1.81 1.798±0.96 0.426±0.29 1.582±1.45
ENST00000622334 N/A N/A N/A N/A 1.853±0.00 N/A N/A N/A N/A N/A 1.545±0.00 N/A N/A N/A
ENSG00000243988 ENST00000479895 0.027±0.00 0.650±0.00 8.703±0.00 N/A 0.111±0.00 0.026±0.00 0.051±0.00 5.968±0.00 0.025±0.00 0.026±0.00 0.124±0.00 0.046±0.01 0.157±0.12 0.075±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031766 ENSMUST00000034218 0.045±0.02 0.013±0.00 0.012±0.00 0.037±0.02 0.035±0.01 0.040±0.02 0.029±0.02 201.816±61.77 0.015±0.01 0.050±0.01 0.010±0.00 0.059±0.04 0.043±0.03 0.154±0.05
ENSMUSG00000032939 ENSMUST00000079961 9.222±2.85 4.050±0.56 11.752±0.38 14.518±5.19 5.966±1.67 7.102±0.75 5.122±0.42 4.177±0.77 11.940±11.29 7.629±1.13 3.848±0.32 10.486±2.61 23.100±12.21 6.470±0.84
ENSMUST00000109547 N/A 1.009±0.21 N/A 1.522±0.00 N/A N/A N/A N/A N/A N/A N/A 2.849±0.00 N/A N/A

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