C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: MYC binding protein 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000033004 Mycbp2 10090 - 14:103113411-103346814 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000159855 Mycbp2-001 103113411-103346800 protein_coding
  ENSMUST00000160758 Mycbp2-006 103113411-103346418 protein_coding
  ENSMUST00000161008 Mycbp2-003 103113411-103155263 protein_coding
  ENSMUST00000161278 Mycbp2-002 103155313-103191615 protein_coding
  ENSMUST00000162537 Mycbp2-004 103311695-103346814 retained_intron
  ENSMUST00000162762 Mycbp2-005 103137573-103152214 retained_intron
  ENSMUST00000162852 Mycbp2-007 103114133-103115396 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000159855ENSMUST00000160758ENSMUST00000161008ENSMUST00000161278
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000159855 1.531±0.00 1.435±0.00 N/A 4.932±1.19 1.475±0.00 1.151±0.66 0.546±0.00 0.842±0.09 N/A 1.468±0.57 0.805±0.23 2.369±0.62 0.856±0.00 N/A
ENSMUST00000160758 1.724±0.37 2.475±0.79 2.155±0.89 N/A 1.806±0.76 N/A 0.887±0.09 1.029±0.15 0.566±0.22 1.847±0.40 1.235±0.27 5.037±2.46 4.126±2.97 5.555±0.00
ENSMUST00000161008 14.825±6.06 11.778±1.21 18.143±1.90 32.503±2.95 10.607±2.31 6.197±1.44 3.822±0.39 6.272±0.82 3.672±1.83 8.404±0.86 5.380±0.63 11.831±1.83 14.425±4.60 8.585±1.26
ENSMUST00000161278 N/A N/A N/A 16.075±0.00 N/A N/A N/A N/A N/A N/A N/A 10.861±0.00 8.218±1.71 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00004B CIL_00004B_0002 CGP 14:103080239-103346814
CIL_0004PP CIL_0004PP_0003 CGP 14:103113411-103613346

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004842 IEA ubiquitin-protein transferase activity
GO:0005515 IPI protein binding
GO:0008045 IMP motor neuron axon guidance
GO:0008270 IEA zinc ion binding
GO:0015630 IDA microtubule cytoskeleton
GO:0016020 IEA membrane
GO:0016567 IEA protein ubiquitination
GO:0021785 IMP branchiomotor neuron axon guidance
GO:0021952 IMP central nervous system projection neuron axonogenesis
GO:0030424 IDA axon
GO:0032880 IMP regulation of protein localization
GO:0042177 IDA negative regulation of protein catabolic process
GO:0042803 IPI protein homodimerization activity
GO:0048667 IMP cell morphogenesis involved in neuron differentiation
GO:0051493 IMP regulation of cytoskeleton organization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000001220 mycbp2 MYC binding protein 2 protein_coding Danio_rerio
ENSG00000005810 MYCBP2 MYC binding protein 2, E3 ubiquitin protein ligase protein_coding Homo_sapiens

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