C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: MYC binding protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000159855 Mycbp2-001 ENSMUSG00000033004 10090 - 14:103113411-103346800 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaENSMUST00000159855
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta
ENSMUST00000159855 1.531±0.00 1.435±0.00 4.932±1.19 1.475±0.00 1.151±0.66 0.546±0.00 0.842±0.09 1.468±0.57 0.805±0.23 2.369±0.62 0.856±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00004B CIL_00004B_0002 CGP 14:103080239-103346814
CIL_0004PP CIL_0004PP_0003 CGP 14:103113411-103613346

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 IEA ubiquitin-protein transferase activity
GO:0005515 IPI protein binding
GO:0008045 IMP motor neuron axon guidance
GO:0008270 IEA zinc ion binding
GO:0015630 IDA microtubule cytoskeleton
GO:0016020 IEA membrane
GO:0016567 IEA protein ubiquitination
GO:0021785 IMP branchiomotor neuron axon guidance
GO:0021952 IMP central nervous system projection neuron axonogenesis
GO:0030424 IDA axon
GO:0032880 IMP regulation of protein localization
GO:0042177 IDA negative regulation of protein catabolic process
GO:0042803 IPI protein homodimerization activity
GO:0048667 IMP cell morphogenesis involved in neuron differentiation
GO:0051493 IMP regulation of cytoskeleton organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000124901 mycbp2-201 protein_coding Danio_rerio 0 3598
ENSDART00000039157 mycbp2-001 protein_coding Danio_rerio 0 3598
ENST00000357337 MYCBP2-201 protein_coding Homo_sapiens 0 9814
ENST00000429715 MYCBP2-002 protein_coding Homo_sapiens 0 4566
ENST00000462987 MYCBP2-007 processed_transcript Homo_sapiens 0 252
ENST00000466564 MYCBP2-006 protein_coding Homo_sapiens 0 337
ENST00000474882 MYCBP2-009 processed_transcript Homo_sapiens 0 403
ENST00000482517 MYCBP2-003 processed_transcript Homo_sapiens 0 1895
ENST00000485061 MYCBP2-008 processed_transcript Homo_sapiens 0 745
ENST00000491491 MYCBP2-010 processed_transcript Homo_sapiens 0 761
ENST00000498073 MYCBP2-005 processed_transcript Homo_sapiens 0 1341
ENST00000544440 MYCBP2-001 protein_coding Homo_sapiens 0 9810
ENST00000612956 MYCBP2-202 protein_coding Homo_sapiens 0 1978

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