C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: MYC binding protein 2, E3 ubiquitin protein ligase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000005810 MYCBP2 9606 - 13:77044655-77327050 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000357337 MYCBP2-201 77044658-77327044 protein_coding
  ENST00000429715 MYCBP2-002 77044902-77087514 protein_coding
  ENST00000462987 MYCBP2-007 77098776-77118462 processed_transcript
  ENST00000466564 MYCBP2-006 77121225-77125428 protein_coding
  ENST00000474882 MYCBP2-009 77270031-77273511 processed_transcript
  ENST00000482517 MYCBP2-003 77098068-77126516 processed_transcript
  ENST00000485061 MYCBP2-008 77093286-77097646 processed_transcript
  ENST00000486679 MYCBP2-004 77144117-77150778 processed_transcript
  ENST00000491491 MYCBP2-010 77296603-77327050 processed_transcript
  ENST00000498073 MYCBP2-005 77098885-77140943 processed_transcript
  ENST00000544440 MYCBP2-001 77044655-77326679 protein_coding
  ENST00000612956 MYCBP2-202 77044660-77058334 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000357337ENST00000429715ENST00000544440ENST00000612956
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000357337 3.172±0.00 1.986±0.00 N/A N/A 1.325±0.00 0.801±0.00 1.558±0.00 N/A 0.353±0.00 1.155±0.58 N/A N/A N/A N/A
ENST00000429715 13.708±0.00 9.732±0.00 N/A 11.570±0.00 12.558±0.00 6.764±0.00 3.505±0.00 3.897±0.00 2.174±0.00 4.706±0.00 2.524±0.00 4.274±1.13 2.841±1.33 8.908±0.46
ENST00000544440 3.559±0.00 N/A 1.702±0.00 3.586±0.00 5.970±2.37 4.357±2.71 1.560±0.00 0.906±0.34 4.270±3.92 0.573±0.00 N/A 1.694±1.11 0.986±0.38 2.003±0.08
ENST00000612956 N/A 8.397±0.00 N/A 11.006±0.00 N/A N/A N/A 4.926±0.00 2.346±0.00 3.232±0.00 N/A 5.477±1.55 2.621±0.04 8.050±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00004B CIL_00004B_0001 CGP 13:76992598-77327050
CIL_0004PP CIL_0004PP_0002 CGP 13:77044655-77645263

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004842 IEA ubiquitin-protein transferase activity
GO:0005488 IEA binding
GO:0005515 IPI:IEA protein binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008045 IEA motor neuron axon guidance
GO:0008270 IEA zinc ion binding
GO:0015630 IEA microtubule cytoskeleton
GO:0016020 IDA membrane
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0021785 IEA branchiomotor neuron axon guidance
GO:0021952 IEA central nervous system projection neuron axonogenesis
GO:0030424 IEA axon
GO:0032880 IEA regulation of protein localization
GO:0042177 IEA negative regulation of protein catabolic process
GO:0042803 IEA protein homodimerization activity
GO:0046872 IEA metal ion binding
GO:0048667 IEA cell morphogenesis involved in neuron differentiation
GO:0051493 IEA regulation of cytoskeleton organization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000001220 mycbp2 MYC binding protein 2 protein_coding Danio_rerio
ENSMUSG00000033004 Mycbp2 MYC binding protein 2 protein_coding Mus_musculus

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