C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tripartite motif-containing 33
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000029444 Trim33-201 ENSMUSG00000033014 10090 + 3:103279293-103358768 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000029444
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000029444 1.404±0.41 2.495±0.32 3.565±0.67 1.509±0.91 0.759±0.32 0.824±0.32 1.908±0.76 1.776±1.03 1.132±0.17 4.185±1.18 4.752±0.48 4.026±0.98

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006WV CIL_0006WV_0002 CGP 3:103171655-103358768

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008270 IEA zinc ion binding
GO:0016567 ISS protein ubiquitination
GO:0016874 IEA ligase activity
GO:0017015 ISS regulation of transforming growth factor beta receptor signaling pathway
GO:0030514 ISS negative regulation of BMP signaling pathway
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0070410 ISS co-SMAD binding
GO:0070412 ISS R-SMAD binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000358465 TRIM33-001 protein_coding Homo_sapiens 0 5356
ENST00000369543 TRIM33-002 protein_coding Homo_sapiens 0 3899
ENST00000448034 TRIM33-003 protein_coding Homo_sapiens 0 1840
ENST00000450349 TRIM33-201 protein_coding Homo_sapiens 0 4311
ENST00000476908 TRIM33-004 processed_transcript Homo_sapiens 0 453
ENST00000478032 TRIM33-006 processed_transcript Homo_sapiens 0 337
ENST00000492227 TRIM33-005 processed_transcript Homo_sapiens 0 305

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