C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SUMO1/sentrin specific peptidase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000033075 Senp1 10090 - 15:98038744-98093744 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000044189 Senp1-001 98038744-98093744 protein_coding
  ENSMUST00000180461 Senp1-007 98042886-98048975 processed_transcript
  ENSMUST00000180531 Senp1-006 98088557-98093305 processed_transcript
  ENSMUST00000180657 Senp1-002 98041733-98093251 protein_coding
  ENSMUST00000180716 Senp1-003 98041393-98093569 nonsense_mediated_decay
  ENSMUST00000181349 Senp1-004 98063104-98093370 retained_intron
  ENSMUST00000181855 Senp1-005 98041232-98064237 retained_intron
  ENSMUST00000182611 Senp1-009 98089191-98092887 processed_transcript
  ENSMUST00000183105 Senp1-008 98085042-98087544 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000044189ENSMUST00000180657ENSMUST00000180716
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000044189 N/A N/A 5.953±0.29 5.219±0.17 N/A N/A 2.677±0.21 3.034±1.79 4.475±0.23 3.900±1.18 3.200±1.12 6.094±2.58
ENSMUST00000180657 3.532±1.06 3.464±0.14 N/A N/A 3.235±0.25 2.466±0.34 N/A N/A 3.144±0.00 4.224±0.94 4.572±2.43 8.838±1.41
ENSMUST00000180716 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.149±3.41 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00079B CIL_00079B_0002 CGP 15:97975602-98093744
CIL_00068J CIL_00068J_0002 CGP 15:98038744-98132447

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005925 IEA focal adhesion
GO:0006508 IDA:IEA proteolysis
GO:0006919 IEA activation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0007275 IEA multicellular organismal development
GO:0010724 IMP regulation of definitive erythrocyte differentiation
GO:0016926 IDA protein desumoylation
GO:0016929 IDA:IMP SUMO-specific protease activity
GO:0031965 IEA nuclear membrane
GO:0032435 IMP negative regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0097190 IEA apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000078574 SENP1 SUMO1/sentrin specific peptidase 1 protein_coding Danio_rerio
ENSG00000079387 SENP1 SUMO1/sentrin specific peptidase 1 protein_coding Homo_sapiens

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