C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00079B_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000139219-ENSG00000079387 CGP 9606 12:47972965-48106308
GeneTranscriptPositionBiotype
ENSG00000079387 (SENP1)
SUMO1/sentrin specific peptidase 1 		ENST00000448372 (SENP1-002) 48042974-48105808 protein_coding
ENST00000547181 (SENP1-007) 48088553-48106046 retained_intron
ENST00000547886 (SENP1-009) 48080084-48096427 processed_transcript
ENST00000549518 (SENP1-004) 48045322-48106308 protein_coding
ENST00000549595 (SENP1-003) 48045322-48101472 protein_coding
ENST00000549882 (SENP1-005) 48097737-48106066 retained_intron
ENST00000551358 (SENP1-008) 48063631-48065680 retained_intron
ENST00000551592 (SENP1-010) 48080093-48098034 processed_transcript
ENST00000551798 (SENP1-006) 48083695-48106052 protein_coding
ENST00000552189 (SENP1-001) 48042898-48105834 nonsense_mediated_decay
ENSG00000139219 (COL2A1)
collagen, type II, alpha 1 		ENST00000337299 (COL2A1-008) 47973407-48004321 protein_coding
ENST00000380518 (COL2A1-001) 47972965-48004486 protein_coding
ENST00000465743 (COL2A1-005) 48002622-48004362 processed_transcript
ENST00000466884 (COL2A1-004) 47998169-47998859 processed_transcript
ENST00000474996 (COL2A1-002) 47997615-48004449 processed_transcript
ENST00000483376 (COL2A1-006) 47981343-47983855 retained_intron
ENST00000490609 (COL2A1-003) 47999697-48004486 retained_intron
ENST00000493991 (COL2A1-007) 47973201-47988471 processed_transcript
ENST00000546974 (COL2A1-009) 47975353-47977445 retained_intron
ENSG00000152556 (PFKM)
phosphofructokinase, muscle 		ENST00000312352 (PFKM-201) 48122647-48146404 protein_coding
ENST00000340802 (PFKM-001) 48105923-48146104 protein_coding
ENST00000359794 (PFKM-002) 48119226-48146404 protein_coding
ENST00000546465 (PFKM-020) 48122720-48142813 protein_coding
ENST00000546755 (PFKM-012) 48106107-48122841 protein_coding
ENST00000546964 (PFKM-004) 48119343-48146104 retained_intron
ENST00000547066 (PFKM-015) 48119264-48131383 nonsense_mediated_decay
ENST00000547148 (PFKM-026) 48137357-48141316 retained_intron
ENST00000547581 (PFKM-003) 48106106-48146104 nonsense_mediated_decay
ENST00000547587 (PFKM-005) 48122647-48146104 protein_coding
ENST00000548288 (PFKM-029) 48106388-48131368 protein_coding
ENST00000548345 (PFKM-019) 48119391-48134829 protein_coding
ENST00000548720 (PFKM-016) 48119348-48131719 retained_intron
ENST00000549003 (PFKM-009) 48105482-48132980 protein_coding
ENST00000549022 (PFKM-014) 48122574-48133370 protein_coding
ENST00000549366 (PFKM-007) 48106116-48131342 protein_coding
ENST00000549941 (PFKM-010) 48105911-48132989 protein_coding
ENST00000550257 (PFKM-011) 48105923-48131381 protein_coding
ENST00000550345 (PFKM-008) 48105139-48133360 protein_coding
ENST00000550802 (PFKM-027) 48141338-48144073 retained_intron
ENST00000550924 (PFKM-028) 48105621-48132884 protein_coding
ENST00000551339 (PFKM-030) 48119364-48133049 protein_coding
ENST00000551485 (PFKM-018) 48119352-48133320 nonsense_mediated_decay
ENST00000551548 (PFKM-017) 48119352-48131920 processed_transcript
ENST00000551804 (PFKM-006) 48119787-48146104 protein_coding
ENST00000552214 (PFKM-023) 48141672-48142897 retained_intron
ENST00000552752 (PFKM-025) 48137791-48142866 nonsense_mediated_decay
ENST00000552792 (PFKM-013) 48106144-48131392 protein_coding
ENST00000552818 (PFKM-022) 48141705-48142378 retained_intron
ENST00000552989 (PFKM-021) 48119351-48137815 nonsense_mediated_decay
ENST00000553055 (PFKM-024) 48141973-48145051 protein_coding
ENSG00000222635 (RNU6-1203P)
RNA, U6 small nuclear 1203, pseudogene 		ENST00000410703 (RNU6-1203P-201) 48081319-48081428 snRNA
ENSG00000226138 (RP1-228P16.7)
 ENST00000549557 (RP1-228P16.7-001) 48085062-48085421 processed_pseudogene
ENSG00000240399 (RP1-228P16.1)
 ENST00000463559 (RP1-228P16.1-001) 48054971-48055253 transcribed_processed_pseudogene
ENST00000468202 (RP1-228P16.1-002) 48054813-48055591 processed_transcript
ENSG00000257955 (RP1-228P16.5)
 ENST00000547602 (RP1-228P16.5-001) 48019771-48025382 lincRNA
ENSG00000257985 (RP1-228P16.4)
 ENST00000546738 (RP1-228P16.4-001) 48011304-48025469 antisense
ENSG00000258203 (RP1-228P16.3)
 ENST00000546804 (RP1-228P16.3-001) 48007981-48011227 lincRNA
ENST00000552958 (RP1-228P16.3-002) 48005277-48011227 lincRNA
ENSG00000276814 (RP1-228P16.8)
 ENST00000616571 (RP1-228P16.8-001) 48039784-48040761 lincRNA
CIL_00079B_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022483-ENSMUSG00000033075 CGP 10090 15:97975602-98093744
GeneTranscriptPositionBiotype
ENSMUSG00000022483 (Col2a1)
collagen, type II, alpha 1 		ENSMUST00000023123 (Col2a1-001) 97975602-98004695 protein_coding
ENSMUST00000088355 (Col2a1-002) 97975602-98004657 protein_coding
ENSMUST00000127879 (Col2a1-004) 97998371-98001887 processed_transcript
ENSMUST00000128547 (Col2a1-007) 97988111-97990476 processed_transcript
ENSMUST00000131560 (Col2a1-009) 97998578-98004635 protein_coding
ENSMUST00000131910 (Col2a1-008) 97986309-97988921 retained_intron
ENSMUST00000133488 (Col2a1-005) 97995019-97999693 processed_transcript
ENSMUST00000139246 (Col2a1-006) 97994868-97999465 retained_intron
ENSMUST00000140064 (Col2a1-003) 98000243-98004657 retained_intron
ENSMUSG00000033065 (Pfkm)
phosphofructokinase, muscle 		ENSMUST00000051226 (Pfkm-201) 98108471-98132447 protein_coding
ENSMUST00000163507 (Pfkm-202) 98092589-98132447 protein_coding
ENSMUSG00000033075 (Senp1)
SUMO1/sentrin specific peptidase 1 		ENSMUST00000044189 (Senp1-001) 98038744-98093744 protein_coding
ENSMUST00000180461 (Senp1-007) 98042886-98048975 processed_transcript
ENSMUST00000180531 (Senp1-006) 98088557-98093305 processed_transcript
ENSMUST00000180657 (Senp1-002) 98041733-98093251 protein_coding
ENSMUST00000180716 (Senp1-003) 98041393-98093569 nonsense_mediated_decay
ENSMUST00000181349 (Senp1-004) 98063104-98093370 retained_intron
ENSMUST00000181855 (Senp1-005) 98041232-98064237 retained_intron
ENSMUST00000182611 (Senp1-009) 98089191-98092887 processed_transcript
ENSMUST00000183105 (Senp1-008) 98085042-98087544 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00079B_0001ENSG00000079387ENST00000448372ENST00000549518ENST00000549595ENSG00000139219ENST00000337299ENST00000380518ENST00000474996ENST00000490609ENST00000493991ENST00000546974ENSG00000152556ENST00000312352ENST00000340802ENST00000359794ENST00000546964ENST00000547587ENST00000551804ENSG00000222635ENST00000410703ENSG00000226138ENST00000549557ENSG00000240399ENST00000463559ENST00000468202ENSG00000257955ENST00000547602ENSG00000257985ENST00000546738ENSG00000258203ENST00000546804ENST00000552958ENSG00000276814ENST00000616571CIL_00079B_0002ENSMUSG00000022483ENSMUST00000023123ENSMUST00000088355ENSMUST00000128547ENSMUST00000131560ENSMUST00000131910ENSMUST00000133488ENSMUST00000139246ENSMUSG00000033065ENSMUST00000051226ENSMUST00000163507ENSMUSG00000033075ENSMUST00000044189ENSMUST00000180657ENSMUST00000180716
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000079387 ENST00000448372 N/A 2.727±0.00 1.800±0.00 N/A 2.136±0.28 N/A N/A 0.205±0.00 1.141±0.32 N/A N/A 4.214±1.24 1.734±0.00 43.780±0.00
ENST00000547181 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547886 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549518 N/A N/A N/A N/A N/A 3.088±0.00 N/A 0.635±0.00 N/A N/A N/A N/A N/A N/A
ENST00000549595 N/A N/A N/A N/A N/A N/A N/A 1.105±0.00 N/A 2.617±0.00 N/A N/A N/A N/A
ENST00000549882 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551358 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551592 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551798 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552189 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000139219 ENST00000337299 N/A N/A N/A 0.029±0.00 N/A N/A N/A N/A N/A N/A N/A 0.015±0.00 N/A 0.245±0.00
ENST00000380518 N/A N/A N/A N/A 0.102±0.00 N/A N/A N/A N/A 0.088±0.00 N/A 0.550±0.22 0.279±0.06 0.385±0.27
ENST00000465743 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466884 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474996 N/A N/A N/A 0.072±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483376 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490609 N/A N/A N/A N/A N/A N/A N/A N/A 0.404±0.00 N/A N/A 0.225±0.00 N/A N/A
ENST00000493991 N/A 0.015±0.00 N/A 0.075±0.01 0.029±0.00 0.037±0.00 0.007±0.00 N/A 0.036±0.00 N/A 0.032±0.00 N/A 0.105±0.04 N/A
ENST00000546974 N/A N/A N/A N/A N/A 0.099±0.00 N/A N/A N/A N/A N/A N/A 0.537±0.22 N/A
ENSG00000152556 ENST00000312352 N/A N/A N/A N/A N/A 1.600±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000340802 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 21.624±0.00
ENST00000359794 N/A N/A N/A 7.286±0.00 3.019±0.00 N/A 6.171±0.00 N/A N/A 1.814±0.00 N/A 3.528±0.00 N/A N/A
ENST00000546465 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000546755 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000546964 N/A 5.049±0.00 4.570±0.00 9.533±2.08 4.939±0.00 4.798±0.00 6.578±0.00 4.204±3.34 7.240±0.00 2.213±0.39 N/A 6.527±2.85 N/A 15.148±0.00
ENST00000547066 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547148 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547581 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547587 4.061±0.00 N/A 5.354±0.00 N/A 10.426±0.00 4.802±0.38 31.738±17.18 N/A 1.976±0.87 6.077±0.00 160.608±71.03 14.846±10.72 11.419±1.43 53.614±0.00
ENST00000548288 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548345 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548720 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549003 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549022 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549366 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549941 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550257 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550345 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550802 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550924 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551339 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551485 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551548 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551804 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.813±0.00 N/A N/A N/A N/A
ENST00000552214 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552752 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552792 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552818 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552989 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553055 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000222635 ENST00000410703 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.414±0.00 N/A N/A
ENSG00000226138 ENST00000549557 0.055±0.00 0.242±0.00 N/A N/A N/A N/A 0.554±0.00 0.192±0.00 N/A N/A 0.104±0.00 0.121±0.00 N/A 0.055±0.00
ENSG00000240399 ENST00000463559 0.090±0.00 N/A N/A 0.031±0.00 N/A 0.469±0.00 0.227±0.00 0.710±0.00 0.375±0.00 0.304±0.07 0.551±0.00 2.083±1.69 0.285±0.00 0.205±0.00
ENST00000468202 0.090±0.00 0.317±0.00 0.376±0.00 0.197±0.17 0.168±0.02 1.242±0.00 0.109±0.04 0.042±0.00 0.103±0.03 0.248±0.00 N/A 0.259±0.14 0.156±0.03 0.320±0.07
ENSG00000257955 ENST00000547602 N/A 0.043±0.00 N/A N/A N/A 0.059±0.00 N/A N/A 0.062±0.00 0.806±0.00 N/A 0.045±0.00 N/A 0.669±0.54
ENSG00000257985 ENST00000546738 0.010±0.00 0.035±0.00 N/A 0.065±0.00 0.036±0.00 N/A 0.023±0.00 0.075±0.00 N/A 0.041±0.00 0.026±0.00 0.009±0.00 0.012±0.00 0.192±0.05
ENSG00000258203 ENST00000546804 0.081±0.00 0.055±0.00 N/A N/A N/A 0.125±0.00 0.100±0.00 N/A N/A 0.072±0.00 0.024±0.00 0.093±0.00 N/A N/A
ENST00000552958 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.463±0.34
ENSG00000276814 ENST00000616571 0.192±0.00 0.747±0.00 N/A 0.144±0.00 0.109±0.00 0.102±0.00 0.062±0.03 0.109±0.00 0.324±0.24 0.233±0.06 N/A 0.219±0.08 0.279±0.03 0.267±0.20
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022483 ENSMUST00000023123 N/A N/A N/A 9.659±3.13 0.032±0.00 N/A 0.021±0.00 N/A 0.097±0.05 N/A 0.114±0.00 N/A 5.177±1.42 N/A
ENSMUST00000088355 0.010±0.01 0.015±0.01 0.010±0.00 N/A 0.017±0.01 0.015±0.00 0.114±0.11 0.019±0.00 0.077±0.00 0.106±0.09 0.112±0.03 0.029±0.01 0.711±0.85 N/A
ENSMUST00000127879 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128547 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.290±0.00 N/A N/A N/A
ENSMUST00000131560 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.457±0.00 N/A
ENSMUST00000131910 0.050±0.00 0.260±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.083±0.00 N/A
ENSMUST00000133488 N/A N/A N/A N/A N/A 0.103±0.00 N/A N/A N/A 0.061±0.01 N/A N/A N/A N/A
ENSMUST00000139246 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.310±0.00 N/A N/A N/A
ENSMUST00000140064 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000033065 ENSMUST00000051226 16.755±2.92 13.906±4.24 37.961±0.53 85.110±61.52 36.693±32.85 7.959±1.77 279.953±18.52 24.761±3.90 6.468±1.56 17.379±3.23 593.963±120.83 22.478±4.64 10.176±5.75 15.264±6.15
ENSMUST00000163507 N/A 12.675±4.99 N/A N/A 53.281±29.43 2.721±0.00 N/A N/A 11.116±8.94 10.814±0.00 615.881±220.15 10.576±6.27 6.042±0.00 38.212±9.35
ENSMUSG00000033075 ENSMUST00000044189 N/A N/A 5.953±0.29 5.219±0.17 N/A N/A N/A 2.677±0.21 3.034±1.79 4.475±0.23 N/A 3.900±1.18 3.200±1.12 6.094±2.58
ENSMUST00000180461 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000180531 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000180657 3.532±1.06 3.464±0.14 N/A N/A 3.235±0.25 2.466±0.34 N/A N/A N/A 3.144±0.00 N/A 4.224±0.94 4.572±2.43 8.838±1.41
ENSMUST00000180716 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.149±3.41 N/A
ENSMUST00000181349 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000181855 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182611 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000183105 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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