C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SUMO1/sentrin specific peptidase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000180657 Senp1-002 ENSMUSG00000033075 10090 - 15:98041733-98093251 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonLungOvaryPlacentaTestisENSMUST00000180657
Transcript ID Adipose Adrenal Breast Colon Lung Ovary Placenta Testis
ENSMUST00000180657 3.532±1.06 3.464±0.14 3.235±0.25 2.466±0.34 3.144±0.00 4.224±0.94 4.572±2.43 8.838±1.41

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00079B CIL_00079B_0002 CGP 15:97975602-98093744
CIL_00068J CIL_00068J_0002 CGP 15:98038744-98132447

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0006508 IDA:IEA proteolysis
GO:0010724 IMP regulation of definitive erythrocyte differentiation
GO:0016926 IDA protein desumoylation
GO:0016929 IDA SUMO-specific protease activity
GO:0032435 IMP negative regulation of proteasomal ubiquitin-dependent protein catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000448372 SENP1-002 protein_coding Homo_sapiens 0 1522
ENST00000549518 SENP1-004 protein_coding Homo_sapiens 0 1162
ENST00000549595 SENP1-003 protein_coding Homo_sapiens 0 1147
ENST00000551358 SENP1-008 retained_intron Homo_sapiens 0 424
ENST00000552189 SENP1-001 nonsense_mediated_decay Homo_sapiens 0 1522

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