C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SUMO1/sentrin specific peptidase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000044189 Senp1-001 ENSMUSG00000033075 10090 - 15:98038744-98093744 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainKidneyLiverLungOvaryPlacentaTestisENSMUST00000044189
Transcript ID Bladder Brain Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000044189 5.953±0.29 5.219±0.17 2.677±0.21 3.034±1.79 4.475±0.23 3.900±1.18 3.200±1.12 6.094±2.58

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00079B CIL_00079B_0002 CGP 15:97975602-98093744
CIL_00068J CIL_00068J_0002 CGP 15:98038744-98132447

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005925 IEA focal adhesion
GO:0006508 IDA:IEA proteolysis
GO:0006919 IEA activation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0007275 IEA multicellular organismal development
GO:0010724 IMP regulation of definitive erythrocyte differentiation
GO:0016926 IDA protein desumoylation
GO:0016929 IDA:IMP SUMO-specific protease activity
GO:0031965 IEA nuclear membrane
GO:0032435 IMP negative regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0097190 IEA apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000448372 SENP1-002 protein_coding Homo_sapiens 0 2499
ENST00000549518 SENP1-004 protein_coding Homo_sapiens 0 2300
ENST00000549595 SENP1-003 protein_coding Homo_sapiens 0 2080
ENST00000551358 SENP1-008 retained_intron Homo_sapiens 0 424
ENST00000552189 SENP1-001 nonsense_mediated_decay Homo_sapiens 0 2316

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