C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: potassium channel tetramerisation domain containing 17
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000033287 Kctd17 10090 + 15:78428564-78438909 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000089414 Kctd17-001 78428628-78438909 protein_coding
  ENSMUST00000159771 Kctd17-004 78428662-78438843 protein_coding
  ENSMUST00000160916 Kctd17-008 78432987-78437734 retained_intron
  ENSMUST00000161016 Kctd17-007 78428691-78435860 retained_intron
  ENSMUST00000162321 Kctd17-005 78428796-78438647 nonsense_mediated_decay
  ENSMUST00000162517 Kctd17-003 78428564-78438497 protein_coding
  ENSMUST00000162605 Kctd17-006 78433982-78437579 retained_intron
  ENSMUST00000162808 Kctd17-009 78430086-78438580 protein_coding
  ENSMUST00000166142 Kctd17-002 78428564-78438497 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000089414ENSMUST00000159771ENSMUST00000160916ENSMUST00000161016ENSMUST00000162605
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000089414 41.185±5.72 34.166±5.08 16.535±0.00 19.283±3.06 40.444±4.39 29.767±4.34 19.492±1.22 1.175±0.32 14.085±1.60 N/A 29.126±0.08 N/A N/A
ENSMUST00000159771 N/A N/A N/A 25.294±0.44 N/A N/A 14.585±0.00 1.654±0.34 N/A 1.298±0.00 N/A 19.716±0.00 N/A
ENSMUST00000160916 28.664±14.59 20.179±5.91 N/A 28.433±0.00 37.947±15.52 15.784±5.14 17.278±6.03 1.908±1.14 N/A N/A 39.655±6.68 36.805±0.00 0.867±0.00
ENSMUST00000161016 N/A N/A N/A N/A N/A N/A N/A 1.569±0.00 N/A N/A N/A N/A 2.045±0.00
ENSMUST00000162605 N/A N/A N/A 27.346±0.00 N/A N/A N/A 0.707±0.17 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00036R CIL_00036R_0002 CGP 15:78406712-78438909
CIL_00036O CIL_00036O_0002 CGP 15:78428564-78468634

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0042802 IEA identical protein binding
GO:0051260 IEA protein homooligomerization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056050 KCTD17 potassium channel tetramerization domain containing 17 protein_coding Danio_rerio
ENSG00000100379 KCTD17 potassium channel tetramerization domain containing 17 protein_coding Homo_sapiens

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