C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: potassium channel tetramerization domain containing 17
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000100379 KCTD17 9606 + 22:37051736-37063390 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000402077 KCTD17-001 37051739-37063390 protein_coding
  ENST00000403888 KCTD17-002 37051739-37063390 protein_coding
  ENST00000421900 KCTD17-007 37051852-37059338 nonsense_mediated_decay
  ENST00000431531 KCTD17-009 37052170-37053195 protein_coding
  ENST00000456470 KCTD17-003 37051876-37063374 protein_coding
  ENST00000462640 KCTD17-006 37057398-37061408 retained_intron
  ENST00000478231 KCTD17-008 37053065-37061564 retained_intron
  ENST00000483389 KCTD17-005 37051905-37059516 retained_intron
  ENST00000610767 KCTD17-201 37051736-37063389 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000402077ENST00000403888ENST00000421900ENST00000456470ENST00000462640ENST00000610767
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000402077 4.369±0.00 8.632±0.00 N/A N/A 1.907±0.00 2.683±0.00 N/A 2.895±0.00 0.353±0.05 1.005±0.83 N/A 4.927±4.30 1.931±0.00 13.337±8.92
ENST00000403888 N/A N/A N/A 4.394±3.22 1.023±0.00 N/A 1.587±0.00 N/A N/A 1.320±0.00 N/A N/A N/A 2.840±0.00
ENST00000421900 N/A N/A N/A N/A N/A N/A 0.477±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000456470 N/A N/A N/A 4.568±2.22 N/A N/A 1.868±0.00 0.507±0.00 0.371±0.00 2.946±0.00 N/A 5.046±1.28 3.018±0.97 13.414±0.00
ENST00000462640 2.587±0.00 6.217±0.00 N/A N/A N/A 6.933±0.00 1.377±0.00 0.627±0.31 1.152±0.00 4.032±0.00 N/A N/A N/A 9.585±0.00
ENST00000610767 1.636±0.00 N/A 0.129±0.00 7.182±5.02 1.372±0.00 3.919±3.34 0.477±0.00 N/A N/A N/A 0.995±0.00 4.480±1.27 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00036R CIL_00036R_0001 CGP 22:37019635-37063390
CIL_00036O CIL_00036O_0001 CGP 22:37051736-37109563

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0042802 IPI identical protein binding
GO:0051260 IEA protein homooligomerization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056050 KCTD17 potassium channel tetramerization domain containing 17 protein_coding Danio_rerio
ENSMUSG00000033287 Kctd17 potassium channel tetramerisation domain containing 17 protein_coding Mus_musculus

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