C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: potassium channel tetramerisation domain containing 17
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000160916 Kctd17-008 ENSMUSG00000033287 10090 + 15:78432987-78437734 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverOvaryPlacentaTestisENSMUST00000160916
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Ovary Placenta Testis
ENSMUST00000160916 28.664±14.59 20.179±5.91 28.433±0.00 37.947±15.52 15.784±5.14 17.278±6.03 1.908±1.14 39.655±6.68 36.805±0.00 0.867±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00036R CIL_00036R_0002 CGP 15:78406712-78438909
CIL_00036O CIL_00036O_0002 CGP 15:78428564-78468634

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000402077 KCTD17-001 protein_coding Homo_sapiens 0 488
ENST00000403888 KCTD17-002 protein_coding Homo_sapiens 0 484
ENST00000421900 KCTD17-007 nonsense_mediated_decay Homo_sapiens 3e-39 165
ENST00000456470 KCTD17-003 protein_coding Homo_sapiens 0 372
ENST00000462640 KCTD17-006 retained_intron Homo_sapiens 0 880
ENST00000478231 KCTD17-008 retained_intron Homo_sapiens 0 488
ENST00000483389 KCTD17-005 retained_intron Homo_sapiens 0 372
ENST00000610767 KCTD17-201 protein_coding Homo_sapiens 0 372

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