C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: potassium channel tetramerisation domain containing 17
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000159771 Kctd17-004 ENSMUSG00000033287 10090 + 15:78428662-78438843 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyLiverMusclePlacentaENSMUST00000159771
Transcript ID Brain Kidney Liver Muscle Placenta
ENSMUST00000159771 25.294±0.44 14.585±0.00 1.654±0.34 1.298±0.00 19.716±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00036R CIL_00036R_0002 CGP 15:78406712-78438909
CIL_00036O CIL_00036O_0002 CGP 15:78428564-78468634

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0051260 IEA protein homooligomerization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000402077 KCTD17-001 protein_coding Homo_sapiens 0 835
ENST00000403888 KCTD17-002 protein_coding Homo_sapiens 0 835
ENST00000421900 KCTD17-007 nonsense_mediated_decay Homo_sapiens 0 418
ENST00000431531 KCTD17-009 protein_coding Homo_sapiens 1e-34 150
ENST00000456470 KCTD17-003 protein_coding Homo_sapiens 0 638
ENST00000462640 KCTD17-006 retained_intron Homo_sapiens 0 272
ENST00000478231 KCTD17-008 retained_intron Homo_sapiens 0 545
ENST00000483389 KCTD17-005 retained_intron Homo_sapiens 0 599
ENST00000610767 KCTD17-201 protein_coding Homo_sapiens 0 1024

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