C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: LIM domain containing preferred translocation partner in lipoma
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000038053 Lpp-201 ENSMUSG00000033306 10090 + 16:24393350-24992576 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000038053
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000038053 4.571±1.18 7.776±2.31 0.692±0.42 5.480±2.75 3.102±0.95 3.217±0.29 6.404±1.57 1.296±1.23 4.945±1.65 1.091±0.15 4.022±2.06 1.835±1.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003Y6 CIL_0003Y6_0003 CGP 16:23965052-24992576
CIL_00003W CIL_00003W_0002 CGP 16:24393350-25422344

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005925 IEA focal adhesion
GO:0007155 IEA cell adhesion
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000414139 LPP-006 protein_coding Homo_sapiens 0 316
ENST00000415906 LPP-019 protein_coding Homo_sapiens 0 673
ENST00000416784 LPP-004 protein_coding Homo_sapiens 0 477
ENST00000420410 LPP-009 protein_coding Homo_sapiens 0 370
ENST00000426274 LPP-008 protein_coding Homo_sapiens 0 278
ENST00000430340 LPP-005 protein_coding Homo_sapiens 0 230
ENST00000443217 LPP-011 protein_coding Homo_sapiens 0 211
ENST00000448637 LPP-002 protein_coding Homo_sapiens 0 1199
ENST00000454789 LPP-007 protein_coding Homo_sapiens 0 276
ENST00000457242 LPP-012 protein_coding Homo_sapiens 0 243
ENST00000459897 LPP-017 processed_transcript Homo_sapiens 0 353
ENST00000462758 LPP-014 processed_transcript Homo_sapiens 0 390
ENST00000471917 LPP-016 processed_transcript Homo_sapiens 0 846
ENST00000487347 LPP-015 processed_transcript Homo_sapiens 0 418
ENST00000616304 LPP-201 protein_coding Homo_sapiens 0 2231
ENST00000617246 LPP-202 protein_coding Homo_sapiens 0 2235
ENST00000618621 LPP-001 protein_coding Homo_sapiens 0 2231

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