C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: LIM domain containing preferred translocation partner in lipoma
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000078988 Lpp-202 ENSMUSG00000033306 10090 + 16:24448091-24992576 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonKidneyLiverLungOvaryPlacentaENSMUST00000078988
Transcript ID Adipose Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta
ENSMUST00000078988 8.843±7.38 30.874±11.15 0.313±0.06 3.955±0.00 7.797±2.68 2.195±1.26 1.118±1.02 2.982±1.39 11.293±4.34 3.582±1.54

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003Y6 CIL_0003Y6_0003 CGP 16:23965052-24992576
CIL_00003W CIL_00003W_0002 CGP 16:24393350-25422344

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0007155 IEA cell adhesion
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000414139 LPP-006 protein_coding Homo_sapiens 0 316
ENST00000415906 LPP-019 protein_coding Homo_sapiens 0 673
ENST00000416784 LPP-004 protein_coding Homo_sapiens 0 477
ENST00000420410 LPP-009 protein_coding Homo_sapiens 0 370
ENST00000426274 LPP-008 protein_coding Homo_sapiens 0 278
ENST00000430340 LPP-005 protein_coding Homo_sapiens 0 230
ENST00000443217 LPP-011 protein_coding Homo_sapiens 0 211
ENST00000448637 LPP-002 protein_coding Homo_sapiens 0 1199
ENST00000454789 LPP-007 protein_coding Homo_sapiens 0 276
ENST00000457242 LPP-012 protein_coding Homo_sapiens 0 243
ENST00000459897 LPP-017 processed_transcript Homo_sapiens 0 353
ENST00000462758 LPP-014 processed_transcript Homo_sapiens 0 390
ENST00000471917 LPP-016 processed_transcript Homo_sapiens 0 846
ENST00000487347 LPP-015 processed_transcript Homo_sapiens 0 418
ENST00000616304 LPP-201 protein_coding Homo_sapiens 0 2231
ENST00000617246 LPP-202 protein_coding Homo_sapiens 0 2235
ENST00000618621 LPP-001 protein_coding Homo_sapiens 0 2231

Loading